Lates calcarifer (barramundi perch): 108890833
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Entry
108890833 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: solute carrier family 12 member 3-like
KO
K14426
solute carrier family 12 (sodium/chloride transporter), member 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108890833
04147 Exosome [BR:
lcf04147
]
108890833
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC12: Electroneutral cation-coupled Cl cotransporter
108890833
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108890833
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLC12
AA_permease
AA_permease_2
AA_permease_N
Motif
Other DBs
NCBI-GeneID:
108890833
NCBI-ProteinID:
XP_018543363
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Position
LG14:10736479..10749466
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AA seq
1029 aa
AA seq
DB search
MGQSTSKGERSGPWARFSGNEEGRGDSSGQQQDGNHAVPPAIVVSDMDLSASGSTTDLRR
SSFYSTVDLVPQLENYASTLPHQKSKSRASLKTLRKAFGGGGAGMDVASTMTDSVNSLPV
IDIGNEESQGSQGKAPVRFGWVTGVMMRCMLNIWGVILFLRLSWIISQAGILLTCLIILM
SVVVTSVTALSISAIATNGRVTSGGAYFMISRSLGPEIGGPIGMVFSFANALACALNTVG
FAEVVRDLMQEFGVVMIDKDNDVRIVGVITVTLLLLISLAGMEWESKAQIFFFTVLMVSF
SNYFVGTFLPPSPEKQAMGIFGYRSEVFISNLKPDWRGNDNDFFQMFAIFFPSAIGILSG
ANISGDLKDPATAIPKGTLMAILLTTISYLAISVTVGSCVMRDASGNISDILTGNITDGC
VGLGCNLGWNFTECIQSQSCEYGLANNLKVLGQVSGFYYLITAGVFAASLSSALGFLVSA
PKVFQCLCRDNLYPYIGFFAKGYGKNDEPLRAYLLCYIIAAAFILIGKLNTIAALISNFF
LCSYCLINFSCFHASITNSPGWRPSFHYYSKWTALFGAVISVVLMFMLTWWAALVTFSII
IFLFGYVNYNKPKVNWGSSVQAGTYNMALSYSVSLSGVEDHVKNFRPQCLVLTGPPNQRP
ALVDFVGSFTKHISLMICGDIIMEQDRQTRMQETTEWLVKWMNKRRVRSFYTPFTADSLR
AGTRHLLQATGLGKLKPNTLVMGFKTNWKDSSPESIEDYVNTIDDTFDSNHCLCILRMMD
GLDVFDQFDSEVNQGFEPEKPVETDDQQSPERVSVDDISSKGDSDQIKTVFQNDQGKKTI
DVYWIADDGGLTLLVPYLLTRRKNWRSSKVRVFIVGDEQNMEEGRNEMIALLKRFRLDFN
DVIVMTDSEKRPHAKSLSRFLDSVAPFRLFDEQQEGVSLEELRQSAPWKISDKEFEAFKL
KSEKIMRLNEIIRRNSQQTALVLVSLPVPESDCPSALYMAWLDTLTCGLHCPAVLIRGNQ
QNVLTFYCQ
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggggcagtccacatccaaaggtgaaaggtcaggcccttgggctcgtttctcaggcaat
gaggaaggacgtggtgattctagcggccaacaacaagatggtaaccatgcggttcctcca
gccattgttgtctcggatatggatttaagtgcgtcaggctcaaccacagacctgcggaga
tcttctttctacagcactgtagacctggtgccacagctggaaaattatgccagcaccctg
ccacaccagaagtcgaagagccgagcttctctgaagactctccgtaaggcatttggtgga
gggggggcagggatggacgtagcaagcaccatgacggactcagtcaacagtctaccagtc
attgacatcggaaatgaggagtctcaaggttctcaggggaaagctcctgttagatttggc
tgggtgactggagtcatgatgcgttgcatgctgaatatctggggcgtcatcctgtttctc
cgcctgtcatggatcatctctcaggccggcatcttgttgacatgcctaattatcctgatg
tctgtggtagtgacctcagtaactgcactctctatctctgccattgccaccaacggaaga
gtgacctcaggtggggcctatttcatgatctcccgctctctgggtcctgaaattggtgga
ccaattgggatggtcttttccttcgccaacgctctggcttgtgcactcaacactgttggc
tttgcagaggttgtccgtgatctaatgcaggagtttggtgtcgtaatgatcgataaagac
aatgatgtccgtattgtgggtgtgatcactgtgactcttctcctgttaatatcattggct
ggaatggagtgggagtctaaggcccagattttcttcttcacagttcttatggtttccttt
tctaactactttgtgggcacattcctccctcccagtccagagaaacaggccatgggcata
tttggataccgcagtgaagtcttcatatcaaacctgaaaccagactggagaggaaatgat
aatgactttttccagatgttcgccattttcttcccctcagccatcggcatcctgtctgga
gctaacatctctggagacctcaaagaccctgctactgctatccccaaaggcacactcatg
gccattctcttgactacaatcagctatctggctatttctgtaactgttgggtcgtgtgtc
atgcgggacgcttctggaaatataagtgacattttgactgggaacatcactgatggctgt
gtgggtctggggtgtaacctgggctggaacttcacagagtgcatccagtcacagtcttgt
gaatatggtctggccaacaatttaaaggtgctgggccaagtttcaggtttctattacctc
atcactgctggtgtctttgccgccagcttgtcatctgctctcggcttcctcgtctctgct
cccaaagtctttcagtgtctgtgcagagacaacttatacccgtacataggattctttgca
aagggttatgggaaaaatgatgagccactccgagcctatctcctctgttacataattgct
gcagctttcatcctcattggcaagctgaacaccatcgcagccttgatctccaacttcttc
ctgtgttcctattgtctcatcaacttcagctgctttcatgcttcaatcaccaactctcct
ggttggaggccgtcatttcactactacagtaaatggacagctttgtttggagctgtgatc
tctgtagtcctgatgttcatgctgacctggtgggctgctctcgtaaccttcagtatcatc
atcttcctgtttggatatgtcaactacaacaagccaaaggtaaactggggatcatcagtc
caggcaggtacatacaacatggctttgtcctactctgtctctctgtctggtgttgaggat
catgtcaagaattttagaccccagtgtcttgtcctgactgggcccccaaaccagcgacct
gcactggtggactttgttggctccttcaccaagcatataagcctcatgatctgtggagac
ataatcatggagcaggacaggcagactcggatgcaggaaaccactgagtggttggtaaaa
tggatgaacaagaggagggtgcgctcgttttatactcctttcactgcagacagcctcaga
gctggaactcgacacttgctgcaggctactggtcttggcaagctgaagcccaacactctt
gtcatgggcttcaagacaaactggaaggacagttctcctgaaagcattgaagattatgtc
aacaccatagatgacaccttcgactcaaaccactgtttgtgtatcttgaggatgatggac
gggctggatgtctttgaccagtttgacagtgaagtgaaccagggctttgaacctgaaaag
cctgttgaaactgatgaccagcaatcccctgaaagggtgtcagttgacgacatctccagt
aaaggtgatagtgatcagatcaagacagtgtttcagaatgaccaggggaagaagaccatt
gatgtctactggatagctgatgatggaggtctgaccttgctggtgccttacctgctcacc
aggagaaaaaactggcgcagcagtaaggtcagggtcttcatcgtgggagatgaacaaaac
atggaggaaggccgcaatgagatgatcgctctgctgaagagattccgtctggattttaat
gatgttatagtcatgacagacagtgagaaacgtccgcacgccaagagcctcagcaggttt
ttggacagtgtcgcccccttcaggttatttgatgaacagcaggaaggcgtctcacttgag
gagctgagacaaagtgccccgtggaaaatatctgacaaagagtttgaggccttcaaactt
aagtctgagaaaataatgaggctgaatgaaatcatccgcaggaattcacaacaaaccgct
cttgtgcttgtgagtcttcctgtgccagagagtgactgccccagtgctctgtacatggcc
tggctggatactctgacctgcggcctccactgccccgcggtgctgatacgaggaaaccag
cagaacgtcctcactttctactgccagtaa
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