Lates calcarifer (barramundi perch): 108891981
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Entry
108891981 CDS
T04895
Symbol
plaub
Name
(RefSeq) plasminogen activator, urokinase b isoform X1
KO
K01348
urokinase plasminogen activator [EC:
3.4.21.73
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108891981 (plaub)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108891981 (plaub)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.73 u-plasminogen activator
108891981 (plaub)
Peptidases and inhibitors [BR:
lcf01002
]
Serine peptidases
Family S1: chymotrypsin family
108891981 (plaub)
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
108891981 (plaub)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
Trypsin_2
DUF316
EGF
DUF1986
EGF_2
Laminin_EGF
Motif
Other DBs
NCBI-GeneID:
108891981
NCBI-ProteinID:
XP_018544894
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All DBs
Position
LG23:complement(16637848..16641947)
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AA seq
478 aa
AA seq
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MIATKNFGVLIWTLAALTTIEAGSWSEGSVFSSSASSSSAFSSSSSSSFSSSFSSSVESS
GGICLNGGTSVPSLTTREHMFCLCADGFEGRQCETAKLLGPHCYEGVGLYYKGTVSSSKT
GRTCEEWDLDTRQRYMSSDVNAGKHNYCRNLYFRRRPWCYVRRNHRLVWEYCNIPHCGSE
SAPPSPSPSPLPSPVPTESQPAAELTCGQRTQRKLMKIVGGTVATVESHPWVAAIFWRSK
SKEKVFRCGGSLISSCWVLTAAHCFPDGSNTKERRFSVILGKNALNETDLTVEQRFRVEK
IIIHEGFDNSEGSFNHDIALMKLRANQGKCAVESDSVRTVCLPPPQQRLQPGVTCEIAGY
GKEKYALWYRSQYLREAQVNLLADDVCRHKDYYENMITDNMFCAGRPDWSQDACEGDSGG
PLVCEVDNRLFQFGVISWGDGCAKEFRPGVYTRVTNYNRWIDEKTNLSITAGAMFPQK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgatagcgacgaaaaactttggtgttttaatatggaccctggcagccctgacaacaatt
gaagctggctcgtggagtgaaggttctgttttttcctcctccgcctcatcctcctcagcc
ttctcatcttcgtcctcctcgtccttctcatcctcattctcctcttccgttgaaagttca
ggtgggatctgtcttaatggaggcacctctgtcccatccctgacgactcgtgaacacatg
ttttgtttatgtgctgatggttttgagggaagacaatgtgaaacagcaaaactactcggt
cctcactgttatgagggtgtagggttgtactacaaaggcacggtgtcttcatcaaagact
ggaagaacatgcgaggagtgggatttggacaccaggcagcgatacatgtcttcagatgtg
aatgcagggaagcacaactactgcagaaatctttacttcagacgtcgtccgtggtgctat
gttcggagaaaccaccggctggtgtgggagtactgtaatatcccacattgtggctcagag
tcagctccaccttcaccttcaccttcacctttaccttcacctgtacccacagagtcacag
ccagctgcagagttgacatgtggccagcgcacccaaagaaagctgatgaaaatcgtgggt
ggaacagttgccactgtggaatcccacccgtgggttgctgccatattttggcgcagcaaa
tccaaagagaaggttttccgctgtggggggagtctgatctcctcctgctgggtcctcaca
gctgcccactgtttcccagacggctcaaacaccaaagagcgccgcttctccgtcatcctg
gggaaaaatgctctgaatgaaacagacctgactgtggagcaaagattcagggtggaaaaa
atcatcatccatgaggggtttgacaacagtgaaggcagcttcaaccacgacatcgctctg
atgaagctgagggccaatcaaggtaagtgtgcagtagagagtgactctgtgaggacggtc
tgcctgccaccacctcagcagcgactccagcctggtgtcacctgtgagattgctggatat
gggaaagagaaatatgctttgtggtacaggtctcagtacctcagagaggctcaggtgaac
ctcctcgcagacgatgtgtgtcgacacaaggactattatgaaaacatgatcactgacaac
atgttttgtgctggtcgtcctgactggagccaagatgcctgtgagggagactcaggaggg
cctctggtgtgtgaggtcgacaacaggctcttccagtttggagttatcagctggggtgac
ggctgcgcaaaggagtttcgacccggtgtttacaccagagtgaccaattataacagatgg
attgacgaaaagaccaatctgtccatcactgctggagccatgttccctcagaagtga
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