Lates calcarifer (barramundi perch): 108894254
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Entry
108894254 CDS
T04895
Symbol
large2
Name
(RefSeq) xylosyl- and glucuronyltransferase LARGE2s isoform X1
KO
K09668
glycosyltransferase-like protein LARGE [EC:2.4.2.- 2.4.1.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00515
Mannose type O-glycan biosynthesis
lcf01100
Metabolic pathways
Module
lcf_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
108894254 (large2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108894254 (large2)
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
O-Glycan
108894254 (large2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_49
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
108894254
NCBI-ProteinID:
XP_018548380
UniProt:
A0A4W6CRJ1
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Position
LG2:13970362..14063266
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AA seq
750 aa
AA seq
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MNLLCRGRLKLLVASLTAIVLLTWLYLLAGNLENGRSLLLAPCLADTPAAHVLERAVLES
RVREVEEENRQIRLQLSQSQGTAVQQPDGNYGNQQWGASADTGPEDGDNTAEEKNNHTEC
PRSPTVQKCELIHVACVCAGHNASRDVVTLVKSVLFHRRNPLHFHFITDTVANRILSSLF
QSWMVPSVQVSFYDADELKSEVSWIPNKHYSGIYGLMKLTLTKALPSDLSKVIVLDTDIT
FATDIAELWGIFRKFTDKQVIGLVENQSDWYLGNLWKNHKPWPALGRGFNTGVILLYLER
LRRIGWEQMWRLTAERELMSMLSTSLADQDIFNAFIKQNPVLVHQLPCFWNVQLSDHTRS
EQCYTEVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRRELFGCPSQASPE
SAQLQTALEELDEDDQCYDFRRERLTVHRVHLYFLQYEYTPTEDDTDITLVAQLSMDRLQ
MLEAICKHWEGPISLALYMSDAEAQQFLRYAQASEVLKNRKNVGYHIVYKEGQFYPVNLV
RNVALKNANTPYVFLTDVDFLPMYGLYDYLRKSVVQLDMAHTKKALVVPAFETLRYRLSF
PKSKAELLSMLDMGTLYTFRYHVWPKGHAPTNYAKWRTSTTPYKVEWEPDFEPYVVVRRD
CPEYDQRFVGFGWNKVSHIMELDAQEYDLMVLPNAFMIHMPHAPSFDISKFRSSSSYRNC
LNTLKDEFHQDLSRKYGATALKYLTAQRNI
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgctgtgtcgtggacgcctgaagctgctggtggcatctctcacggccatcgtc
ctgctcacctggctctacctgctggctggaaacctggagaatggtcgctccctcctcctg
gccccctgtctagccgacaccccggcagcccatgtcctggagcgagccgtcctggagtcg
cgtgtccgagaggtggaggaagagaaccggcagatccggctgcagctcagccaatcgcag
ggcaccgccgtccagcagccagatggtaactacggcaaccagcagtggggagcgtctgca
gacacgggaccggaggacggggacaacacagcggaggagaagaacaaccacacggagtgt
ccccgatcacccaccgtccagaagtgtgagctgatccatgtagcgtgcgtttgtgccggt
cacaacgccagcagagacgtggtcacgctggtcaagtccgtcctctttcataggagaaat
cctcttcactttcatttcatcaccgacacagtagctaatcgtatcctgagttctctgttc
cagtcctggatggtcccgtctgtgcaagtcagcttctacgacgcagatgaactcaagtcc
gaggtgtcgtggatacccaacaagcactactcaggtatttacggcttgatgaagctgacg
ctaaccaaagctttgccctctgacctgtcgaaggtcattgtcctggacacggacatcacc
tttgccactgacatcgccgagctctggggcatttttaggaagtttacagataaacaggtg
attggtctagtggagaaccagagtgactggtacctggggaacctgtggaagaaccacaaa
ccctggcccgcattgggacgaggcttcaacacaggcgtcattcttctctacttggagcga
ctgcggcgaatcggctgggagcagatgtggcggctgacggctgagagggagttgatgagc
atgctcagtacatcactcgccgatcaggacatcttcaatgccttcataaagcagaacccg
gtcctggtccaccagttgccctgtttctggaacgtccagctgtctgatcatactcgctct
gagcagtgctacaccgaggtgtctgacctcaaggtgatccactggaactctccgaagaag
ctccgtgtgaagaacaaacacgtggagttcttcaggaacctgtacctgaccttcctggag
tacgacggaaacctgctgagacgagagctgttcggctgcccaagtcaggccagtccagag
agcgcccagctgcagacagctctggaggagctggacgaggacgatcagtgctatgatttc
cgtcgggagcgactcactgtccaccgtgtgcacctctacttcctgcagtacgagtacacg
cccaccgaggatgacactgacatcacactggtggcccagctctccatggacaggctgcag
atgctggaggccatctgtaaacactgggagggccccatcagcctggcgctctacatgtcg
gacgccgaggctcaacagttcctgcgctatgctcaagcctccgaggtcctcaagaaccgc
aagaacgttggctaccacatcgtctacaaggagggccagttctacccagtcaacctggtg
aggaacgtggccctgaagaacgccaacacaccgtatgtgttcctgactgacgtggacttc
ctgccaatgtacggactctacgattacctcaggaagtctgtggtgcagctggacatggct
cacacgaagaaggctctggtggttccagcgttcgagacgcttcgttaccgtctgtccttc
cccaaatccaaagctgagctgctctccatgctggacatggggactctctacaccttcagg
tatcacgtgtggcccaaaggtcacgctcctaccaactatgccaaatggcgaacatccacc
acaccctataaggtggagtgggagccggactttgagccgtacgtcgtggtgagacgagac
tgccctgagtacgaccagcgctttgtgggctttggatggaacaaagtgtcccacatcatg
gagctggatgcacaggagtacgacctgatggttctacccaacgctttcatgatccacatg
ccccacgctcctagcttcgacatctccaagttccgctccagctccagctaccgcaactgt
ctcaacaccctgaaagacgagttccaccaggacctgtccaggaagtacggtgccaccgct
ctcaagtacctcaccgcccagaggaacatctaa
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