Lates calcarifer (barramundi perch): 108895205
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Entry
108895205 CDS
T04895
Name
(RefSeq) excitatory amino acid transporter 3
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108895205
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
108895205
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GFIT
Motif
Pfam:
SDF
CENPU
DUF5083
Motif
Other DBs
NCBI-GeneID:
108895205
NCBI-ProteinID:
XP_018549375
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Position
LG14:complement(1803252..1820922)
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AA seq
524 aa
AA seq
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MDMMGNKERRGVNFKGLLKRNWLLIATVLSVLLGISLGVVVREYASLSHLHKQYFGFPGE
ILMRMLKLVILPLIISSMITGVAALDSEVSGKIGLRAVIYYFSTTIIAVILGIILVMTIK
PGVSQTTEHIDRAGTTPNVTTVDTLLDLIRNMFPENLVQACFQQYKTKRKELEPPKVPVD
TTTIPPLTTTIMAAVENITKNYKIIGTYSDGINVLGLIVFCVAFGLVIGKMGEKGRILLE
FFDALNEATMKLVQIIMCYMPVGILFLIAAKIIEVEDWEIFRKMGLYMVTVLSGLAIHAT
VCLPLIFFIIVRKNPYTFTLGMAQALVTALMISSSSATLPVTFRCAEENNRIDKRITRFV
LPVGATINMDGTALYEAVAAIFIAQLNDYTLDVGQIVTISITATVASIGAAGVPNAGLVT
MVIVLTAVGLPASDVTLIVAVDWLLDRFRTMINVLGDAYGAGIVQKLSKRELERMDLTSD
VDVANPFALEATLDDEECEKKSYVNGGFTVDKTDAISFTETSQF
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggacatgatgggcaacaaagagcgacgaggcgtgaatttcaaaggcttgctgaagagg
aattggcttctgattgccacggttttatcagtgctgctcgggatcagtttgggtgtcgtg
gtcagagagtatgcttccctctctcatctccacaagcagtatttcggcttccctggagag
atcctgatgcgaatgctgaagctggtcatcctccctctcatcatttcaagcatgataaca
ggtgtcgcagccctggactctgaggtatcagggaagataggtctgcgagctgtcatttat
tacttctcaacaaccatcattgcagttattctgggaattattttggtgatgactatcaaa
ccgggagtctctcagacaactgagcacatcgacagggccgggaccacgcccaacgtcaca
actgttgacacactcttggacctgatcagaaacatgtttccagaaaatctggtgcaggct
tgttttcagcagtacaagaccaagcgtaaagagctggagcctccaaaagttccggtcgac
accaccacaattccacctctcacaacgactatcatggcggcagtggagaatattactaag
aactataaaatcattgggacatattcggatggaatcaacgtgctggggctcatcgtgttc
tgcgtcgcttttggccttgtcattgggaagatgggtgaaaaaggacgcatcctcctggaa
ttttttgatgccctgaacgaagcaaccatgaaactggtccagataattatgtgctacatg
cctgtagggatcctgttcctaattgctgcaaagatcattgaggtggaagactgggagatc
ttcaggaagatgggtctttacatggtgacggtgctgagtggtctagctatccacgccacc
gtctgtctgccactcatcttcttcatcattgtgaggaagaacccatacacattcacactg
ggaatggctcaggccctggtgacagcgctcatgatctcctcaagctctgccactctgccc
gtcaccttccgatgtgccgaggagaacaaccgtatcgacaagcgaatcacccgcttcgtc
ctcccggtgggtgccaccatcaacatggacggcacagcgctctatgaggcggtggctgcc
atcttcatcgcccagctgaatgactacactctggatgtcggtcagattgttaccatcagt
ataacagcaacagttgccagtattggagcagcaggagtccctaacgctggccttgtcacc
atggtgatagtcttaacagccgtaggattacctgcaagtgacgtcaccctgatagtagct
gtggattggctcctggatcggttccgcactatgatcaacgtgctgggtgatgcttacgga
gccggcatcgtccagaaactatccaagagggagctggagaggatggacctgacatcagac
gtggatgtcgccaaccccttcgccctggaggccaccctggacgacgaagagtgcgagaag
aaatcctacgtgaacggaggcttcaccgtcgacaagacagatgcaatctccttcactgaa
acctcccagttttag
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