Lates calcarifer (barramundi perch): 108899348
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Entry
108899348 CDS
T04895
Name
(RefSeq) ATP-dependent RNA helicase DDX51
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcf03009
]
108899348
Enzymes [BR:
lcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108899348
Ribosome biogenesis [BR:
lcf03009
]
Eukaryotic type
Pre-60S particles
Helicases
108899348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
T4SS-DNA_transf
Mitofilin
Motif
Other DBs
NCBI-GeneID:
108899348
NCBI-ProteinID:
XP_018555267
UniProt:
A0A4W6DQA6
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All DBs
Position
LG7_1:22936610..22943455
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AA seq
666 aa
AA seq
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MSLFLVNRYLGEEDDGSVSRESRSQALLAKLQQKAKEKQKQSLTEQRQQLPEEQTVQQNV
RKKRKADKDSSQEPQHHKKRKSEVVPLHVLDSENHDEPVKEEKKKEKGVNETQRKKNQSD
SSVEGLSDTHVTGRDRQEDTAEEEAEEAAENDSTEKTSAPAGFTVVGAFENKPVQKVHRV
LPQWLAQPDVIHRDIKSNLVPVSDISGLCAPLVKKLQNNGIQHFFPVQVEVIPAILESTQ
QGLLIGCGGYKPRDICVSAPTGSGKTLAFVIPVIQVLMKRVVCEVRALAVLPTKELAQQV
CKVFTSYAEGTTLKVVMLAGQKSFAAEQASLSEHRGGVRRTLADIVVATPGRLVDHINKN
SGFCLEHLRFLIIDEADRMIDSMHQSWLSQVVRAVYRSGSRSETMSIFKRAEPAYVTAAS
LSPPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSSIHSHSSTTPAAPTQKQDRFDFPQ
GLTEYYVPCTLSKKPLLILHFILRMKLSPILCFTNSRETAHRLFVLLQLFGGIHAAEFSS
RLSPGERKRTLKEFEQGKIQLLISTDAAARGIDINGVKCVVNYDAPQYIRTYIHRIGRTA
RGGKAGLAFTFLLGVQEKNFLQMVVEAGSPGIQKQVVKPENLKSMEARYEQTLQELANVI
KDEKTR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtttcttgtgaacaggtatcttggagaggaagacgatgggagcgtctcgagg
gagtctcggtctcaggcgttactggctaaactgcagcaaaaggcaaaagaaaagcagaaa
cagagtttgacagaacagagacaacaattacctgaagaacagacagtacagcagaatgtc
agaaagaaaagaaaagctgacaaggacagcagtcaggagcctcaacaccacaaaaagaga
aagtcagaagtagtgcctttgcatgttttggactctgaaaatcacgatgagcctgtcaaa
gaagagaagaagaaggagaaaggtgtaaatgaaacacagaggaagaagaaccagtcagac
agttcagttgaaggtctttcagacactcatgtgactggaagagatagacaggaggacaca
gcagaagaggaagcagaggaagcagcagaaaatgactccacagagaagacttctgctcca
gctggattcacagtggtgggagcatttgagaacaaacctgtccaaaaggtacacagagtc
ctgcctcagtggctcgctcagcccgatgtgattcacagagacattaaaagcaacctggtc
cctgtctctgacatctcagggctttgtgctccacttgtgaaaaaactacaaaataatgga
attcagcacttctttccagtgcaagtagaagtcatcccagccatcttggagagcacgcag
caggggctgctgattggatgtggtggttataagcccagagatatctgtgtgtctgcacca
acaggcagtggcaagactcttgcattcgtcatacctgtcatacaggtgctaatgaagcgg
gtggtgtgtgaagtccgggctttggctgttttgccgactaaagagcttgctcagcaggtt
tgcaaagtgttcacatcatacgctgagggaactactctgaaagtggtgatgctggctggg
cagaagtcctttgctgccgaacaggcttcactctcagaacacagagggggtgtgagacgc
actttagcagacattgttgtggccactccaggtcgactggttgatcacatcaacaagaat
tcaggattctgcctggaacaccttaggtttcttatcattgacgaagcggacagaatgatt
gacagcatgcaccaatcttggcttagtcaggtggtgagggctgtgtacagatcaggaagc
agatctgaaaccatgtccatctttaagagggctgagccagcctatgttacagcagccagc
ctgtctccacctcagatgccactgcagaagctgctgttttctgccacactcactcaaaat
ccagagaagctgcagcagctgggcctccaccagcccagacttttcagctccatccacagt
cattccagcaccacaccagcagcccccacccagaaacaagaccgcttcgacttcccccaa
ggtctgacggagtattatgttccctgtacgttaagcaaaaagcccctcctcatccttcac
ttcatcctgcgtatgaagctcagccccatcctgtgtttcaccaactccagagagactgca
cacaggctttttgtgctgctgcagctctttggtggaattcatgctgccgagttctcttcc
cgactctctcctggtgagagaaagaggacgctgaaggaattcgaacaaggaaagatccaa
ctgttgatcagcacagatgcagctgccagaggcatcgacatcaatggagtcaaatgtgtg
gtgaattatgatgcaccacagtacatcaggacgtacattcacaggattggaagaacagca
agaggtgggaaagcagggctggccttcacctttctgcttggagtacaggagaagaacttc
cttcagatggtggtggaagcaggaagccccggaattcaaaagcaagttgttaaacctgag
aacctcaagagtatggaagctcgatatgagcaaacactgcaagagctggctaacgttatc
aaggatgagaaaacccgataa
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