Lates calcarifer (barramundi perch): 108900434
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Entry
108900434 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: hairy/enhancer-of-split related with YRPW motif-like protein
KO
K09091
hairy and enhancer of split related with YRPW motif
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108900434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108900434
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
108900434
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GFIT
Motif
Pfam:
HLH
Hairy_orange
Motif
Other DBs
NCBI-GeneID:
108900434
NCBI-ProteinID:
XP_050921698
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Position
LG3:complement(6398766..6403399)
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AA seq
330 aa
AA seq
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MKRPHDYSSPDSDTDEFIDVGQEDSYCPVTGSMSPGSASQILARKKRRGVKRRRDRINHS
LSELRRLVPSAFEKQGSSKLEKAEILQMTVDHLKLLHAMGGKGYFDXRALAVDYRTLGFR
ECVGEVVRYLSSLEGESPDPIGARLXSHLSHCASELDPLLLQSXPGSALPFPPWPWASFP
QISPTSPASSSPPFPNGRRDLALLGSYPSPASLRLAPLAGCQQGAPPLLAPTALATVHRM
PSLAASPALAPSRPTQPSPHCATRASPLPLPTXSSSSPSSSSSSSTSSTSAPPQVSFRPF
APLGSPTAQRRGLSGSAKATQGWGTEIGAF
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacctcacgactacagctccccagactcggacacagacgagtttattgacgtg
ggacaagaagacagctattgcccagtcaccgggtccatgtctcctggcagcgcctcgcag
attctggctcgaaagaagagaagaggggtgaagaggcgcagagaccgcatcaaccacagc
ctgtcagagctccgcagacttgtacccagtgcttttgagaaacagggttcatctaagctg
gagaaagcagagattctgcagatgacagtggaccacctcaaactgctgcatgccatggga
ggaaaaggatactttgatncgagggccttggcagtcgattataggaccctgggttttagg
gagtgtgttggggaggtggtgcggtacctcagttcccttgagggggagtccccggaccct
ataggagcccgcctgnngtcccacctctcacactgcgcaagtgagttagaccctctcctc
ttacagtcgngccccggctccgccttgcccttccctccttggccgtgggcgtcctttcct
cagatctcccccacctcgccagcctcctcctcgcctccattccccaacgggcgacgggat
ctcgccctgctggggagctacccatcgcctgcctccctccgcctcgcccccttggctggc
tgccagcaaggcgcaccgccactcctcgcgcccacagctctggccaccgtccacaggatg
ccctccctcgctgcgtccccagccctcgccccctccaggccgacccagccatcccctcac
tgtgccaccagggcctcgcctcttcccctccccaccncttcctcttcctctccctcctcc
tcctcctcctcttctacttcatcaacctctgctccgccgcaagtctctttcaggcccttt
gcgcctctggggtctcccacagcccagcgcaggggcttgagcggttcagccaaggcgacc
cagggatgggggactgagatcggagccttctga
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