Lates calcarifer (barramundi perch): 108900496
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Entry
108900496 CDS
T04895
Name
(RefSeq) myelin transcription factor 1 isoform X1
KO
K23192
myelin transcription factor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108900496
03036 Chromosome and associated proteins [BR:
lcf03036
]
108900496
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
108900496
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
108900496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2HC
MYT1
XhlA
DUF1664
Motif
Other DBs
NCBI-GeneID:
108900496
NCBI-ProteinID:
XP_018557092
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All DBs
Position
LG6:1183589..1201465
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AA seq
1204 aa
AA seq
DB search
MSQDITETRTRTRSKGIRVSSELVGQDMKQELSSSCPTPGCDGKGHVSGRYSRHRSVLGC
PIVKKRKLEEAEAEENQSAPKRRNQPAKQAADDGFTADSDAAEEEEEQKEEEEEEDEELK
EKRKNKTKNRPESTDGSLVTTEDTETAVCPPAEDDKNESVTSDTGSKPEREKTSEEVKPV
TLTDDHQQEETETQEKEGGQLVTKDQPSEHCEEEMGVTEIKQAKQEEEEEAGEEEKEEEE
QHERQENIVKEREVERKMISQENSDHQYSSGDYNHQAKESAVEQSKRAEHEEEEEEEEEE
EEEEGEGEGEEEDEGEEREVHQEVDTPYTLSPRTQGSEAEVSLREEKVSSPMTEEEEEDV
EQEEEREEEEDERQGKEAGEVVEEEEEDQDSSKASPTTVVIEVHSEEDEDEDEEEGEEEE
DEEEEEEEEGEEQDRVSEGSGITDDSENWDMTRGNLGLLEQAIALKAEEVKGGQEARSSP
EYQPYSTSSQSSEPAAVARRAAHYSKEKKEVKCPTPGCDGTGHVTGLYPHHRSLSGCPHK
DRIPPEILAMHENVLKCPTPGCTGQGHVNSNRNTHRSLSGCPIAAAAKLNKNQDKQVHLQ
ASASEPSSNSDRVLRPMCFVKQLEIPQYGSYRPNTVTTTPRANLAKELEKYSKVSFDYAS
FDVQVFGKRMLIPKTPSTTETSPKAFKSKSFPKASSPSHSVSGGFSKSASSSSGYDYSQD
AEAAHMAATAILNLSTRCWERPETLSTKPREPCAKESDIEVDENGTLDLSMKKTKREGMQ
SPEPSSSSSSSSQHVGTTLSQGHAQPEWEGPLDFTKPSGVKEEDHEEVEYTAPSYTSSDG
EEEDQENLEDRKYPGEVTTSSFKVKFQPKDSKKEVLVCPTPGCDGSGHITGNYASHRSLS
GCPLADKSLRTLMAAHTAELKCPTPGCDGSGHITGNYASHRSLSGCPRAKKSGVKSTPTK
DDKEDSELLRCPVPGCDSLGHISGKYATHRSAYGCPLAARRQKEGLLNGTPFSWKAFKTE
GPTCPTPGCDGSGHANGSFLTHRSLSGCPRASANKKRAKFPGDEYITAKFRASDVLDNDE
DIKQLNKEINELNESNSEMETDMMNLHTQISSMEKNLKSMEEENKQIEERNEALFLELSG
LSQALIRSLANIRLPTMQEPLSEQNFDSYVETLTHMFTNKDCYQNPENRALLESINQAVK
GIEV
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagacattacagagacacgaacacgcacccgttccaaaggcatccgtgtgtca
tcagaacttgtgggacaggacatgaagcaggagttgagtagcagctgtcccacccctgga
tgtgatggcaaaggccacgtcagtggaagatactcacgacacagaagcgtactgggatgc
ccgatagtgaagaaaaggaagctagaggaggccgaggccgaggagaaccagtctgctccc
aagaggaggaaccaacctgccaaacaggcagcagatgacggcttcactgcagacagtgat
gcagcagaggaggaggaggagcagaaagaggaggaagaggaggaagatgaagagctcaaa
gagaagagaaaaaacaaaacaaaaaacaggccagagtcaacagacggttcactggtgaca
acagaggacacagaaacagcagtttgtcctccagctgaagatgacaagaatgaaagcgtc
acctcagatactgggagcaaacctgaacgtgagaaaactagtgaggaagtgaagccagta
acactcactgatgatcatcaacaggaggaaacagagacacaggagaaggaggggggtcag
ctggtgacaaaggaccagccatcagagcattgtgaagaagaaatgggggttactgagatt
aaacaggcaaaacaagaggaggaagaggaagcaggagaagaagaaaaggaagaggaagag
cagcatgaaaggcaagaaaatatagtgaaggagagggaggtagagagaaagatgataagc
caggaaaactctgatcaccagtactccagtggcgattacaaccatcaggccaaagaatca
gcagtggagcagagtaagagggcggaacacgaggaggaggaggaagaggaggaggaggag
gaggaggaggaaggagagggagagggagaggaagaagacgagggagaagagagggaggtc
caccaagaggttgacactccttacactttgagtccacgcactcagggatctgaagccgag
gtgtcactcagggaagaaaaggtcagcagccccatgactgaggaagaggaggaggatgta
gagcaggaggaggagagagaggaagaggaggatgaaaggcaggggaaggaagcaggcgag
gtggtggaggaggaagaggaggaccaagactcgagcaaagcctctccaactacagtggtc
atagaagtccactctgaggaggatgaagacgaggatgaggaggaaggggaggaggaggaa
gatgaggaggaggaggaggaggaggaaggagaggagcaggaccgtgtctcagaaggctca
ggaatcacagatgactcagagaactgggatatgactcgagggaacctggggctgttggag
caggccatcgccctgaaggcagaagaggtgaaggggggccaggaggcccggagctcccca
gaataccaaccatacagcacctccagccagagctctgagcctgctgctgtagcccgccgt
gctgctcactacagcaaagagaagaaggaggtgaagtgtcccaccccaggatgtgatggg
acaggtcatgtgactgggctgtaccctcaccatcgcagtctatctggatgtcctcacaaa
gaccgaatccctccggagatcctggccatgcatgagaacgtcttgaagtgtccaactcct
ggctgcacaggccaaggtcatgtcaacagtaaccgcaacacacaccgcagtctgtccggc
tgccccattgcagctgcagctaaactgaacaagaaccaggacaagcaggttcatttacag
gcttcagccagtgaaccctcctccaactctgacagagtgctcaggcccatgtgttttgtg
aaacagctggagatccctcagtatggcagctaccggcccaacacagtgaccaccacgcct
cgagctaacctggccaaggagctggaaaaatactccaaggtgtcttttgactatgcaagc
tttgatgtccaggtgtttggaaagcgtatgctcattccaaagacacccagcaccactgaa
acatcacccaaagccttcaaatctaaatcattccctaaggcctcctcccccagtcacagt
gtgtctggaggattttctaagagcgcctcatcctccagtggttatgactatagccaagat
gcagaggcagcccacatggcagcaacagccatcctcaacctgtccactcgctgctgggag
agaccggagactctcagcaccaagcccagggagccctgtgccaaggagtcggatattgaa
gtggatgaaaacggcactttggacctcagcatgaagaagaccaagagggaaggcatgcag
tctccagagccttcatcctcctcgtcttcatcctctcaacacgttggaaccaccttgtct
cagggccacgctcagccagagtgggaggggccgctggactttaccaaaccaagtggagtc
aaagaggaggaccatgaagaggtggagtacacggctccctcatatacctcatctgatggt
gaggaagaggaccaggagaacctggaggacaggaagtaccctggagaggtcaccaccagc
agcttcaaggtcaagtttcagcccaaagacagcaaaaaagaggttcttgtatgtcccacc
ccaggctgtgatggcagtggacacattactggcaactacgcatcacatcgaagtctgtca
ggctgtcctcttgctgataaatcacttcggaccctcatggctgcccacacagctgaacta
aagtgtccgactccaggttgtgacggatcaggccacatcactggaaactatgcttcacat
agaagtctgtctggatgccctagagccaagaaaagcggggtcaaatcaacccccaccaag
gatgacaaggaagactcagagctgttgaggtgtccagttcctggctgtgacagtctgggc
cacatcagtgggaagtatgccactcaccgcagtgcctatggctgtcctctggcagcacgt
cggcagaaagaaggacttcttaatggcactcccttctcctggaaggccttcaagaccgaa
ggcccgacctgcccgacgccaggctgcgacggctctggccacgctaacggcagtttcctg
acacaccgcagtctgtcaggttgtccaagagcatcggccaacaagaagagagccaagttc
cctggagacgagtatattactgcaaagttcagagccagtgatgttctggacaacgatgaa
gacatcaagcagctcaacaaagagatcaacgagctgaatgagtccaactcagagatggag
accgatatgatgaacctgcacactcagatctcctcaatggagaagaacctgaagagcatg
gaggaggagaataaacagattgaggaaaggaacgaggctctgttcctggagctatcaggc
ctgagtcaggccctgatccgcagcctggccaacatccgcctgcccaccatgcaggagcca
ctgtcagagcagaacttcgacagctacgtggaaaccctgacccacatgtttaccaataaa
gactgctaccagaaccctgagaaccgggcgttgctcgagtccatcaatcaggctgtgaag
ggcatcgaggtgtga
DBGET
integrated database retrieval system
