Lates calcarifer (barramundi perch): 108902597
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Entry
108902597 CDS
T04895
Name
(RefSeq) WD repeat and SOCS box-containing protein 2 isoform X1
KO
K10342
WD repeat and SOCS box-containing protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108902597
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul5 complex
Target recognizing subunit
108902597
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Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
SOCS_box
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
108902597
NCBI-ProteinID:
XP_018560077
UniProt:
A0A4W6E7C5
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Position
LG13:1184538..1190568
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AA seq
420 aa
AA seq
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MCSTENNAELLPTSSDPALILELKTRRPPSLVGRAGCETWSVDFSPDGAWFAWSMGHGIV
WVVAWPLDSEDSQNGETDRGDKSFSCGHPVWGLAFGPRPKSAAVAQPAKTSSKGNNSLLL
ATGLENGVIKIWNVLTGDAVFDLHGHEGVVRDLVFPRNGTLTLISSSRDKTLRIWDLAHK
GKKVQVLSGHKDWISCCCVSSDCSMIASVGRFDRMVCLWSLRSYTFIRNLTGGTRKTLYL
LSSCDFSPDGALLATAAFSGSSWWIDLWDPYTAEKLATLVDYFEDYGQNQISAIQFSPNG
LHLAIVTDDSRALRIWEPGKKGMVMQTKADRDSNGLCCNYHPQGGVVATGTRDGHVRFWR
APRTVPSLCHLCRSILRHSVSTHQMEPLPLPKRILEYLTYRNIPERLRTCCSSEEEEWEG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtgctccacggaaaacaacgcggagctgctaccgacatcgtcagacccagctcttatc
ctggagctgaagaccaggcgccctccgtccctggtcggccgagcgggatgcgagacctgg
agcgtcgacttctccccggacggagcctggttcgcctggtcgatgggacacggcatcgtc
tgggtggtcgcctggcccctcgactccgaagacagtcagaatggagaaaccgaccgaggt
gacaagagcttcagctgtggtcacccagtgtggggcctcgccttcggaccaagaccgaaa
tcagctgcggtggcacagccggccaaaacatcatcaaaagggaacaacagcctgcttctg
gccacaggcttggagaacggggtgatcaaaatctggaatgtgttaacaggcgatgctgtg
tttgatctccatggccacgaaggagttgtgagggacctggtcttccctcggaatgggacg
ctcacgctcatatcgtcttctcgagacaaaaccttgaggatctgggacctggctcacaaa
ggtaaaaaggtgcaggtgctctctggccacaaagactggatcagctgctgctgcgtgtcg
tcagactgcagcatgattgcatctgtcggcagatttgacagaatggtgtgtctgtggagt
ctacggtcgtatacattcatcagaaacctgacaggagggactcgcaagaccttgtacctc
ctgtcttcctgtgacttctctcctgatggggcactgctcgccactgcagccttcagcggc
tccagttggtggatcgacctctgggacccgtacacagcagagaaactggccactttggtt
gactactttgaagattacgggcaaaaccaaatctcagcaatacaattctcacccaacggt
ttgcacttggcgattgtgactgacgacagcagagctcttcggatctgggagccgggaaag
aaagggatggtgatgcagaccaaagcagaccgagactctaatggactctgctgcaactac
catccacaagggggagtggtcgccacaggaaccagagacggccatgtgagattctggagg
gcgcccaggacggtccccagcctgtgccacctgtgccgatccatcctgcgccattcggtc
tccacacaccagatggagccactgcccctccccaagaggatcctggagtacctcacctac
agaaacatccctgaacgcctcaggacatgctgctcctcagaggaagaggagtgggaaggg
tga
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