Leptothrix cholodnii: Lcho_3239
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Entry
Lcho_3239 CDS
T00681
Name
(GenBank) glycoside hydrolase family 4
KO
K07406
alpha-galactosidase [EC:
3.2.1.22
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00052
Galactose metabolism
lch00561
Glycerolipid metabolism
lch00600
Sphingolipid metabolism
lch01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Lcho_3239
09103 Lipid metabolism
00561 Glycerolipid metabolism
Lcho_3239
00600 Sphingolipid metabolism
Lcho_3239
Enzymes [BR:
lch01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
Lcho_3239
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_4C
Glyco_hydro_4
CbiG_N
Motif
Other DBs
NCBI-ProteinID:
ACB35497
UniProt:
B1Y1N5
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All DBs
Position
complement(3591795..3593219)
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AA seq
474 aa
AA seq
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MRDASPRRLKITLIGAGSTVFTRNLLGDMLSHPELAGAEIALHDIDEHRLRLSEKVAYRI
ADAVGAKPVITASTDRRRALDGARFVLNTIQVGGYKPATVTDFDIPKKYGLEQTIGDTLG
IGGIMRGLRTIPVQLAMLRDMDELCAPGAVHLNYVNPMAMITWALNRASTRVPTVGLCHS
VQHTAQELANDLGLPVDEIQYHCAGINHMSFYLRFERNGEDLYPKLRDIQREGRMPAWNR
VRYEMLRQLGHFPTESSEHFAEYVPWFIKQGREELLRKFNIPLDEYPGRCQVFEHAWPYI
ERELEVPGSQDPAALLAQLRAADIHVMQREIEGAPQMLEGLRSVKRSVEYGSAIIHSIVT
GQPRVINGNVLNHQLIDNLPQGCAIEVPCLVDHNGVQPTRVGKLPVHLAALMRTNVNVQE
MVVESVLEQRRDHVYHAAMLDPHTAATLDLDQIRAMVDELLAAHRPFLPEYLHG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatgcctccccgcgccgactgaagatcaccctgatcggtgccggcagcaccgtc
ttcacccgcaacctgctgggtgacatgctcagccatcccgagctcgcgggcgccgagatc
gcgctgcacgacatcgacgaacaccgcctgcggctgtccgaaaaggtggcctaccgcatc
gccgacgcggtgggcgccaagccggtgatcaccgccagcaccgaccgccgccgcgcgctc
gacggcgcgcgcttcgtgctcaacaccatccaggtcggcggctacaagccggccaccgtg
accgacttcgacatccccaagaaatacggcctcgaacagaccatcggcgacacgctgggc
atcggcggcatcatgcgcggcctgcgcacgatccccgtgcagttggcgatgctgcgcgac
atggacgagctgtgcgcgcccggcgccgtgcacctcaactacgtcaacccgatggcgatg
atcacgtgggcgctcaaccgcgcctcgacgcgcgtgcccaccgtcggcctgtgccacagc
gtgcagcacaccgcgcaggagctggccaacgacttggggctgccggtcgacgagatccag
taccactgcgccggcatcaaccacatgtcgttctacctgcgcttcgagcgcaacggcgag
gacctgtaccccaagctgcgcgacatccagcgcgagggccgcatgccggcctggaaccgc
gtgcgctacgagatgctgcgtcagctggggcactttccgaccgagtcgagcgagcacttt
gccgagtacgtgccgtggttcatcaagcagggccgcgaggagctgctgcgcaagttcaac
atcccgctcgacgagtacccgggccgctgccaggtgttcgaacacgcctggccctacatc
gagcgtgagctcgaagtgcccggctcgcaggatccggccgcgctgctggcgcagctgcgc
gccgccgacatccacgtcatgcagcgcgagatcgaaggcgcgccgcagatgctcgaaggc
ctgcgctcggtcaagcgcagcgtcgaatacggcagcgcgatcatccattcgatcgtgacc
ggccagccgcgcgtgatcaacggcaacgtgctcaaccaccagctgatcgacaacctgccg
caaggctgtgcgatcgaggtgccgtgcctggtcgaccacaacggcgtgcagcccacgcgc
gtgggcaaactgcccgtgcacttggcggcgctgatgcgcaccaacgtcaacgtgcaggag
atggtggtggagtcggtgctcgaacagcggcgcgaccacgtctaccatgcggcgatgctc
gacccgcacaccgccgccacgctcgatctggatcagatccgcgcgatggtcgacgagctg
ctggcggcgcaccggcccttcctgcccgagtacctgcacggctga
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