Leptothrix cholodnii: Lcho_3322
Help
Entry
Lcho_3322 CDS
T00681
Name
(GenBank) alpha amylase catalytic region
KO
K05341
amylosucrase [EC:
2.4.1.4
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00500
Starch and sucrose metabolism
lch01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Lcho_3322
Enzymes [BR:
lch01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.4 amylosucrase
Lcho_3322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Malt_amylase_C
DUF3459
Motif
Other DBs
NCBI-ProteinID:
ACB35580
UniProt:
B1Y2C7
LinkDB
All DBs
Position
complement(3695405..3697423)
Genome browser
AA seq
672 aa
AA seq
DB search
MAIRKSPVSSPASSRLASRAASAQIDGSVPATTRVAVPAWAASDEQQSRVWAALSEQLGD
DAQWPAFDARLRAHLGDLRRELAPLYGARPDFEAFLIKLLGNAFSAWRERSPELKALDQA
READPQWFHSNRMLGGVCYVDLFAGDLKGIEASIPYFKELGLTYLHLMPPFLCPEPHSDG
GYAVSSYRAVKPSLGRIEDLRHLAQRLREEGISLVLDFVFNHTSDEHDWARGALAKDPFY
SEFFYIFPDRTQPDAYERTVREIFPDEHPGAFSQLEDGRWVWTTFHSYQWDLNYGNPEVF
NAMAGEMLFIANLGVEFLRMDAVAFIWKRLGTPCENLPEAHHLLRAYNALARIAAPSLLF
KSEAIVHPDDVVKYIEPAECQISYNPLQMALLWNTLATREVNMLQKALEQRHHIPDGTAW
VNYVRSHDDIGWTFADEDAIQMGIQGFDHRTFLNRFYVNRFAGSFARGVPFQDNPATGDC
RISGTAASLCGLEQGDPHAVARLLLLYGVVLSSGGIPLIYLGDEIGALNDLHWADDPGHG
GDSRWVHRPVRDLARSAQRDDPSTAPGRIYAGLRHLIALRQHLPSLAGGRLHAFWTRNRS
VLGYLRSGEGQGGGGNILVLGNFSEHPQAIDAAVLLGMPAAAVDLIGQTAFNLRTGFTLA
PYQMVWLDCRGG
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gtggccattcgaaaatctcccgtctcatcccccgcttcttcacgactcgccagccgcgcc
gccagcgctcagatcgacggttccgtccccgccacgacccgcgtcgcggtgccggcctgg
gccgcatccgacgagcagcagagccgcgtctgggcggccctgagcgaacagctcggcgac
gatgcgcaatggcctgcattcgacgcccgcctgcgcgcgcatctgggcgacctgcgccgc
gagctggcgccgctgtacggcgcgcggccggacttcgaagcctttctgatcaagctgctg
ggcaatgccttcagcgcctggcgcgaacgctcgcccgagctgaaggcgctcgaccaggcg
cgcgaggccgatccgcaatggttccactcgaaccgcatgctcggcggcgtctgctacgtc
gacctgttcgccggcgacctgaaaggcatcgaggccagcatcccctatttcaaggaactg
gggctgacctacctgcacctgatgccgccttttctgtgccccgagccgcacagcgacggc
ggctatgcggtgagcagctaccgggcggtcaagccgagcctgggccgcatcgaggatctg
cgccatctggcgcaacggctgcgcgaggagggcatctcgctggtgctcgacttcgtcttc
aaccacaccagcgacgaacacgactgggcccgcggcgcactcgccaaggatccgttctac
agcgagttcttctacatcttcccggaccgcacccagcccgacgcctacgagcgcacggtg
cgcgagatcttccccgacgaacaccccggcgccttcagccagctcgaggacggccgctgg
gtctggaccaccttccacagctaccagtgggacctcaactacggcaaccccgaggtcttc
aacgcgatggccggcgagatgctgttcatcgccaacctgggcgtcgagttcctgcgcatg
gacgcggtggcgttcatctggaagcgcctgggcacgccttgcgagaacctgcccgaagcg
caccacctgctgcgcgcctacaacgcgctggcgcgcatcgccgcaccgtcgctgctgttc
aagtccgaggccatcgtgcacccggacgacgtggtcaagtacatcgaaccggccgagtgc
cagatctcgtacaacccgctgcagatggcgctgctgtggaacacgctggccacgcgcgag
gtcaacatgctgcagaaggcgctggagcagcgccaccacatccccgacggcaccgcctgg
gtcaactacgtgcgcagccacgacgacatcggctggacctttgccgatgaggatgcgatc
cagatgggcatccagggcttcgaccaccgcaccttcctgaaccgcttctacgtcaaccgc
tttgccggcagcttcgcgcgcggcgtgccgttccaggacaacccggccaccggcgactgc
cgcatcagcggcacggcggcgtcgctgtgcgggctggagcagggcgacccgcacgcggtg
gcgcggctgctgctgctgtacggcgtggtgctgtcgtcgggcggcatcccgctgatctac
ctgggcgacgagatcggcgcgctcaacgacctgcactgggccgacgaccccggccacggc
ggcgacagccgctgggtgcaccgccccgtgcgcgacctggcgcgctcggcccagcgcgac
gacccgagcaccgcgccgggccgcatctacgccggactgcgacacctgatcgcgctgcgc
cagcacctgccgtcgctggccggtggccgactgcatgcgttctggacccgcaaccgctcg
gtgctcggttatctgcgcagcggcgagggccagggcggcggcggcaacatcctcgtgctc
ggcaatttcagcgaacacccgcaggcgatcgacgcggcggtgctgctgggcatgccggcc
gcggcggtcgacctgatcggccagaccgcgttcaacctgcgcaccggtttcaccctggcg
ccgtaccagatggtgtggctcgattgccggggcggttga
DBGET
integrated database retrieval system
