Leptothrix cholodnii: Lcho_3713
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Entry
Lcho_3713 CDS
T00681
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18138
multidrug efflux pump
Organism
lch
Leptothrix cholodnii
Pathway
lch01501
beta-Lactam resistance
lch01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Lcho_3713
01503 Cationic antimicrobial peptide (CAMP) resistance
Lcho_3713
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_3713
01504 Antimicrobial resistance genes [BR:
lch01504
]
Lcho_3713
Transporters [BR:
lch02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Lcho_3713
Antimicrobial resistance genes [BR:
lch01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Lcho_3713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
ACB35967
UniProt:
B1Y5S1
LinkDB
All DBs
Position
complement(4153223..4156399)
Genome browser
AA seq
1058 aa
AA seq
DB search
MNSQFFIDRPIFAWVIALFILILGGAAITKLPVAQYPTVAPPSIVINTAYPGASAQVLED
SVLAVIEQELNGAPGLIYMESSADANGSGQITATFEPGTDVSIAQIEIQNRLSRATPRLP
SSVVQQGVRVDKARANFLLFVMLTSKNPAYDPVALGDYAARNIQPELLRVPGVGQAQLFG
TERAMRIWIDPAKLVGLGLTPADVNAAIRAQNIQVSAGSIGGLPSVAAQSTYATVTVSGQ
LASVAQFGEILLRSNADGSSVRLKDVARIELGAQTYATSARLNGVTATGIGVQLAPTGNA
LATAQAIKARLAELQQFMPEGVSYDVPYDSSRFVSISIEQVVKTLIEAIALVFLVMFLFL
QNFRYTLIPTIVVPVALLGTFAVMLTLGFSINVLTLFGMVLAIGILVDDAIVVVENVERI
MAEEGLSPVEATRKAMGQITGAIIGITVVLVSVFVPMAFFAGSVGNIYRQFSLSMVASML
FSALMALTLTPALCATLLKPIDPGHHEKKGFFGWFNRAFKRTTHGYEGLVARIIRKAGRY
LVIYGVVLAAVGFMYTRLPTSFLPNEDAGYLIVNVQLPPGAAIERTEAVMAQVEDFFLKQ
PEVAKVVGVLGFSFSGAGQNAALAFVPLKDWSERKGQAQSAQALAGRAFGALMGIRDAFI
FPLSPPPIPELGNATGFTFRLQDRTGQGRAALLAARNQLLGMASQSKVLAGVRPDGLEDA
PQLQLDIDRERAAAMGVGFDSIASVLGTSFGSAYINDFPNAGRLQRVVVQAEASARMQPE
DLLKLYVPNNRGQQVPMSAFASTRWVVGPIQTVRYNGYPAMKISGDTAKGYSTGDAMAEM
ERLAAQLPPGFGFEWTGQSREEKLSGSQAMILLAFSMLAVFLCLAALYESWSIPVAVLLV
VPLGILGALSGVWLRDMPNDVYFKVGLITIIGLSAKNAILIIEFAKDLQAEGKGLLEATL
EACHLRFRPIIMTSFAFILGVLPLAIASGAGSASQRAIGTGVMGGMITATVLAVFLVPVF
FVVIRRLFPSTHLMHLGGTISSAANDAAAAEALGRTEK
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgcaattcttcatcgaccgcccgatcttcgcgtgggtgatcgcgctgttcatc
ctgatcctcggcggtgcggccatcaccaagctgccggtggcgcagtacccgacggtggcg
ccgccgtcgatcgtcatcaacaccgcctatccgggcgcctcggcgcaggtgctcgaagac
agcgtgctggccgtgatcgagcaggagctcaacggcgcgccgggcctgatctacatggag
tcgagcgccgacgccaacggcagcggccagatcaccgccaccttcgagcccggcaccgac
gtgtcgatcgcgcagatcgagatccagaaccgcctgagccgcgccacgccgcgcctgccc
tcgtcggtggtgcagcagggcgtgcgggtcgacaaggcgcgcgcgaacttcctgctgttc
gtgatgctgacgtccaagaacccggcctacgacccggtcgcgctgggtgactacgcggcg
cgcaacatccagcccgagctgctgcgggtgcccggcgtgggccaggcccagctgttcggc
accgagcgggcgatgcggatctggatcgacccggccaagctggtcggcctgggcctgacg
ccggccgacgtgaacgccgcgatccgggcccagaacatccaggtctcggccggcagcatc
ggcggtctgcccagcgtggcggcgcagtcgacctacgccaccgtgaccgtcagcggccag
ctcgccagcgtggcgcagttcggcgagatcctgctgcgcagcaacgccgacggctccagc
gtgcgcctgaaagacgtcgcccgcatcgagctgggcgcgcagacctacgccacctcggcc
cgcctgaacggcgtcaccgccaccggcatcggcgtgcagctcgcgcccaccggcaacgcg
ctggccaccgcccaggcgatcaaggcccgcctggccgagctgcagcagttcatgcccgag
ggcgtgagctacgacgtgccctacgacagctcgcgcttcgtcagcatctcgatcgagcag
gtcgtcaagacgctgatcgaggcgatcgcgctggtgttcctggtgatgttcctgttcctg
cagaacttccgctacacgctgatcccgaccatcgtggtgccggtggcgctgctgggcacc
ttcgcggtgatgctgacgctgggtttctcgatcaacgtgctcacactcttcggcatggtg
ctggcgatcggcatcctggtcgacgacgccatcgtggtggtcgagaacgtcgagcgcatc
atggccgaggagggcctctccccggtcgaggccacccgcaaggcgatgggccagatcacc
ggcgccatcatcggcatcacggtggtgctggtcagcgtgttcgtgccgatggcgttcttt
gccggttcggtgggcaacatctaccgccagttctcgctgtcgatggtggcgtcgatgctg
ttctcggcgctgatggcgctgacgctcacgccggcgctgtgcgccacgctgctcaagccg
atcgacccgggccatcacgagaagaagggtttcttcggctggttcaaccgcgccttcaag
cgcaccacgcatggctacgaggggctggtggcccgcatcatccgcaaggccgggcgctat
ctggtgatctacggcgtggtgctggcggcggtgggcttcatgtacacccggctgccgacc
tccttcctgcccaacgaggacgccggttacctgatcgtcaacgtgcagctgcccccgggc
gcggcgatcgagcgcaccgaggcggtgatggcgcaggtcgaggacttcttcctgaagcag
cccgaggtcgccaaggtggtgggtgtgctgggcttcagcttctcgggcgccggccagaac
gccgcgctggccttcgtgccgctcaaggactggagcgagcgcaaggggcaggcgcagtcg
gcgcaggcgctggccgggcgggccttcggcgcgttgatgggcatccgcgatgcgttcatc
ttcccgctcagcccgccgccgatccccgagctgggcaatgccaccggcttcaccttccgg
ctgcaggaccgcaccggccagggccgcgccgccctgctggccgcgcgcaaccagctgctg
ggcatggcgagccagagcaaggtgctggccggcgtgcgtccggacggcctggaagacgcg
ccgcagctgcagctcgacatcgaccgcgaacgcgcggccgcgatgggcgtcggcttcgac
agcatcgccagcgtgctcggcacctcgttcggttcggcctacatcaacgacttcccgaac
gccggccggctgcagcgggtggtggtgcaggccgaggccagcgcgcgcatgcagcccgag
gacctgctcaagctctacgtgcccaacaaccgcggccagcaggtgccgatgtcggccttc
gccagcacgcgctgggtggtcggcccgatccagacggtgcgctacaacggctatccggcc
atgaagatcagcggcgacaccgccaagggctacagcaccggcgacgccatggccgagatg
gaaaggctcgccgcccagctgcctccgggcttcggcttcgagtggaccggccagtcgcgc
gaggaaaagctctcgggctcgcaggccatgatcctgctggcgttctcgatgctggcggtg
ttcctgtgcctggccgcgctgtacgagagctggagcatcccggtggccgtgctgctggtg
gtgccgctgggcatcctgggggcgctgtcgggcgtgtggctgcgcgacatgcccaacgac
gtctacttcaaggtcggcctgatcaccatcatcggcttgtccgccaagaacgcgatcctg
atcatcgagttcgccaaggacctgcaggccgaaggcaagggcctgctcgaagccacgctc
gaagcctgccacctgcgctttcggccgatcatcatgacctcgttcgccttcatcctcggc
gtgctgccgctggcgatcgccagcggtgccggctcggccagccagcgtgccatcggcacc
ggcgtgatgggcggcatgatcaccgccacggtgctggcggtgttcctggtgccggtgttc
ttcgtcgtcatccggcgcctgttcccgagcacccacctgatgcatctgggcggcacgatc
tcgtcggctgccaacgatgccgcggccgccgaagcgctgggccgcacggagaaatga
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