Lichenicola cladoniae: HN018_19000
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Entry
HN018_19000 CDS
T07054
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lck
Lichenicola cladoniae
Pathway
lck01501
beta-Lactam resistance
lck01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HN018_19000
01503 Cationic antimicrobial peptide (CAMP) resistance
HN018_19000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lck02000
]
HN018_19000
01504 Antimicrobial resistance genes [BR:
lck01504
]
HN018_19000
Transporters [BR:
lck02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HN018_19000
Antimicrobial resistance genes [BR:
lck01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HN018_19000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
TMEM138
Ctr
ANIS5_cation-bd
Motif
Other DBs
NCBI-ProteinID:
QKE91839
UniProt:
A0A6M8HTJ4
LinkDB
All DBs
Position
complement(4205415..4208582)
Genome browser
AA seq
1055 aa
AA seq
DB search
MISGVFIDRPRLAIVIAIIITLAGIVGLARIPVSQFPDIVPPQVQVAATFPGASAAVVEA
SVAQPIEAQVVGVDKMIYMRSVSGNDGSYNLTVSFLLGTNPDVNTTNVLNRVTTAEAQLP
AIVNTEGLTVQKRSSAILQFINFYSPSRKFDPLFIANYLTINVIDEIARTTGVGQASLLS
RQKYSMRIWFDANRLTNLGLSPSDITAAVSAQNTVAAVGRIGARPTGPNQQYQLNVQTQG
RLVTPEQFGQIVIRANPDGSTLRLRDVARIELGAQTLDSETRFDGQPSVAIAIYLAPGAN
ALDSADAIKKLVSRLSQRFPAGLKYNVTYDSTDFVHDTIHEVIKTIGEAFLLVVLVVFLF
LGSVRATIIPTAAVPVSLIGAFAGMTAIGFSANTVSLLAMVLAIGIVVDDAIVVVENVER
VMEEEPDLSPPDAAKKAMTQITGPIIAITMVLLSVFVPIAFIPGLSGVLFKQFAVTICIA
MLISALNALTLSPALCGVFLRHSGPRRGIMAKVMGAIDRTRNGYSRVVKRLLGFAFGGVI
VVVTCAVIIGFMQKTMPIGFLPEEDQGGFFINVQLPDGASVARTSGVISRVEKLAAALPG
AAHTFGVIGYSIIDTVQESNTGFVFVRLKAFADRTKATESANALIARVAGEVQGIRQASV
FPFNLPPIIGLSPGGGFEYELEALEGQDPSALGAQVQGLLAAANKSPDEARVFTTYTSTT
PSLYLDIDRVKAQALGVNISDIFTTLQTALGGTYVNDFNLFGRVWQVNVEGESYNRQTID
DLWRLYIRNSSGGTVPLRALASLKTITGPQAITRYNNYRAVTIQGSPAAGVSSATSLDTM
ARISARTLKTGYGYEWTSTAYQQVQASGKTGIILAMAILFAYLFLVGLYESWIIPIPVLM
SVSVAVLGAFIGIKIAGLALDLYAQIGLVVLIALSAKNGILIVEFAKERREAGESIREAA
IQGAHMRFRAVMMTSFAFILGLLPLVTATGAAQISRRDVGTPVFAGMLAASCVGIFIIPM
LYVTFQTMREWFHRKLGIASQVGTAGPKDHHHAAE
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgatttccggcgtctttatcgaccggccccggctggcgatcgtcattgcgatcatcatc
acgctggctggtatcgtcgggctggcgcgtattccggtgtcgcagttcccggatatcgtc
ccgccgcaggtgcaggtcgcggcgaccttcccgggtgcgtccgccgcggtcgtcgaagca
tcggtcgcccagccgatcgaggcccaggtcgtcggcgtcgacaagatgatctacatgcga
tcggtcagcggcaatgacggttcgtacaacctgaccgtcagcttcctgctgggcaccaat
cccgacgtcaatacgaccaacgtcctgaaccgcgtgacgaccgccgaggcccagttgccg
gcgatcgtcaacaccgagggcctgactgtccagaagcgttcgtcggcgatcctgcagttc
atcaatttctatagcccgagccgcaagttcgacccgctgttcatcgccaactacctgacg
atcaacgtgattgacgaaatcgcccgcaccaccggcgttggccaggcatccctgctgtcg
cgccagaaatactcgatgcgtatctggttcgacgcgaaccgcctgaccaacctcggcctg
tcgccttcggatattaccgcagcggtttcggcacagaacacggtcgctgcggtcggacgg
atcggcgcgcgcccgaccgggccgaaccagcaataccagctcaacgtgcagacccagggc
cggctcgtcacccccgaacagttcgggcagatcgtcattcgcgccaatcccgatggatcc
actctcaggctacgcgatgtggccaggatcgagctcggtgcgcagacgctggactcggaa
acccgtttcgatggccagccttcggtcgcgatcgccatctatctcgcaccaggcgccaac
gcgctggacagtgcggacgcgatcaagaagctggtcagccggctgagccagcgtttcccc
gcaggcctcaaatacaacgtcacgtacgacagcaccgacttcgtgcacgacacgatccat
gaagttatcaagacgattggcgaggcttttttgctcgtcgtcctcgtggtgttcctgttc
ctgggtagtgtccgtgccaccatcattccgacggcggcggtgccggtcagcctgatcggc
gccttcgccggcatgaccgcgatcgggttctcggcaaataccgtctcgctgctggccatg
gtgctggcgatcggcatcgtggtcgacgatgcaatcgtggtggtcgagaacgtcgagcgg
gtcatggaggaggagcctgatctgtccccgcctgacgccgccaagaaggcgatgacgcag
atcaccgggccgatcatcgcgatcaccatggtgctgttgtcggtgttcgtgccgatcgcg
ttcatcccggggctgtcaggcgtgctgttcaagcagttcgccgtgacgatctgcatcgcg
atgctgatttccgcgctgaacgccctgaccttgtcgccggcgttgtgcggtgtgttcctg
cggcattccggcccgaggcgcggtatcatggccaaggtgatgggtgcgatcgaccgcacc
cggaacggctattcccgggtcgtcaaacggctgctcgggtttgcgttcggtggcgtcatc
gtcgtcgtgacgtgcgcggtgatcatcggcttcatgcagaagacaatgccgatcggcttc
ctgccagaggaagaccagggcggcttcttcatcaacgtccagcttcccgacggcgcgtcg
gtagcccgcaccagcggagtgatcagccgggtcgagaaattggccgcggcgctgccgggg
gcggcacacaccttcggcgtgatcgggtattcgatcatcgacaccgtccaggaatccaac
accgggttcgtgttcgtgcggttgaaggcgttcgcggatcggaccaaggcgaccgagagt
gcgaacgcgttgatcgcccgggtagccggcgaggtccagggcattcggcaggcctcggtg
ttcccgttcaacctgccgccgatcatcggcctgtccccgggcggcgggttcgaatacgag
ctcgaggctctggaaggtcaggatccgagcgctctcggagcccaggtgcaggggctcctc
gccgcggcgaacaagagtcccgacgaagcgcgtgtcttcacgacctatacgtcgaccacg
ccgtccctctatctcgatatcgaccgggtcaaggcgcaggcgctcggcgtcaacatcagc
gatatcttcacgacgctgcagacggcactgggtggcacctacgtcaacgacttcaacctg
ttcgggcgtgtctggcaggtcaatgtcgagggcgaatcttataatcgccagaccatcgac
gatctgtggcggctctatatccgcaactccagcggcggcaccgtgcccttgcgtgcgctg
gccagcctgaagaccatcaccggcccgcaggcaatcacccggtacaacaactatcgggcg
gtgacgatccagggcagtccggccgcgggcgtgtcatccgccacgtcgctcgacaccatg
gcccggatctccgccaggaccctcaaaaccggttatggctacgagtggaccagcacggcg
taccagcaggtccaggccagcgggaagaccggcatcatcctggcgatggcgatcctgttc
gcctacctgttccttgtcggcctttatgaaagctggattatcccgatcccggtgctgatg
tccgtcagcgttgccgtgctgggggctttcatcggtatcaagatcgccggcttggcgctt
gacctgtatgcccagatcgggctcgtcgtgctgatcgccttgtctgcgaaaaacggcatc
ctgatcgtcgaattcgccaaggagcggcgcgaggcaggcgaaagcatccgggaggccgcg
atccagggcgcccacatgcggttccgcgcggtcatgatgacctcgttcgccttcatcctg
ggccttttgccgctggtgaccgcgacgggtgccgcccagatcagtcgtcgcgatgtcggg
acaccggtgttcgccggaatgcttgccgcaagctgcgtcggaatcttcatcattccgatg
ctttacgtaaccttccaaacgatgcgggagtggttccaccggaagctcggcattgcctcc
caggtcggaacggcgggacccaaggatcatcatcacgcagcggaatga
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