Latimeria chalumnae (coelacanth): 102349857
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Entry
102349857 CDS
T02913
Symbol
FREM1
Name
(RefSeq) FRAS1 related extracellular matrix 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102349857 (FREM1)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Motif
Other DBs
NCBI-GeneID:
102349857
NCBI-ProteinID:
XP_014351051
Ensembl:
ENSLACG00000000266
LinkDB
All DBs
Position
Un
AA seq
1970 aa
AA seq
DB search
MKFSLNWKCHLFVFLVLLLKNTDSTFIKANHGIKATKGQSAFLSEKHLQFDIPKEKDACK
IEVVMNEPITQRVGKLIPQVFDCHFLPNEVKYIHGGCPILDEDQVMLRLYRFTETETFTE
TFLLRVTLIDADCNIIKLGSKPLEVPEFYGLSNVIDRNVLMFDYDRKLNLECTVRVATLE
SLLPAHGQLVIGELLKEEPHGDQPQSFFPLRPQSKHKGGLRCRAGNCQKGLKQIKTTKVS
CEEFLVMGLKYQHLDPPSPEIDYIAIRLDLTDSRSRTVYKSEHAWIPVRIRNAIPNQIPK
AAFMSMFILEVDQFILTPMTIGALDAEDSETPQNLLVFNITTPPPQGYITHLSDHTKPIT
SFTWQDLNEMLIAYQPPNSSHTERRNYEVEFEVHDFFFKKSAPIMVHISIRTADTNAPRV
SWNMGLNLLEGQSRPITWEQFQIVDNDDISAVRLITVDGLQHGRLTVRGGKGFMFTVSDI
KAGVVRYHHDDSDTTKDFVVFRIFDGRHSIRHKFPINILPKDDSPPFLITNVVFELCEGQ
NILIQCSMLQASDMDSSDDYILFNITKPPQAGEIVKQPGPELIGYPVTSFLQRDLFNAII
YYHHLGGEVFEDSFEFVLSDSHDPPNLSEPQAVIIHIAPVDDQLPKEVPGVVRQLVVKET
EIVHLTKRQLHFMDTESPDRQLTYTITTTPFFTSVYGRPDAGRLFLVDSVPKLVKDPTAL
MLRSFTQHAVNYMKVAYMPPIQDIGPDPQHVQFIFSVSNQHGGTLIGICFNITVLPVDNQ
APEVFTNQLKVEEGGVGRITVDHLLVNDADTKPEDLRVWLRRKPLYGQLQLDGFSMKEGD
SFTLEDLKTFKARYQHDGSEVLRDEIFLTATDGINSEECVLQIKVLPVNDEPPVIKNGLS
PMMQCLEGEEVVITSEYLYAIDADSDDMKLSYIIVRQPFYGVVRKSGIIVDGFSQADIVS
ELVTYKHTGREIGLTPCFDTITVVISDDEAEAGKSCCYDGLHHPQVPFHGSFPVYDLNIT
VFPVDNQPPSIVIGDMFVVDEGSSAVITVNHLCATDPDTPVDELQFVLVAPPQFGYIENT
LPSPGFEKSNTGISIASFRLKHLKDLHINYVQSRHQRIEPTADQFMVYVTDGKHQSVETP
LYIIIRPTNDEVPEFLARNITVHEGQMKELDPSVINAVDMDIPRDHLVFTITKQPRHGMF
MEGLYGNDLTRYKRLIHSHQNHALLLHDFTMDHLKNGMKLMYMHDDSENMADSFTVQLSD
GKHKVRKAVSVKIIPLNDEKPILVKNSGMQVYMGETRTISSLVLSAEDKDTPREGVYYMF
DSAPKHGLLQLKEGRDWATLSAGMNCTQDNIDMNLLRFVHTGAMGSKGQDDFKFHLWDKE
NRSPLQTFYISIKDMEKGEIVTFIKLLRVSKGDRVLLTTNFLLAVDGSDRPEELLYVITS
PPMYGQIEYVNYPGSVVTNFSQMDVAAQTVCYVHKSKAHATKDSFRFIVSNGLSTKNGTF
EIIIENVDCALPTVSKNKGMRLVEGTMMIISPEILQLSDPDSPPQNLTYLIAQFPQYGQL
YRRKAVLNQHNFTQQDIDNMDIAYRHGGGASQIDRFTFIASDKSNHGFLVNGRMHTEPVV
FTIEVDRLNKTTPRIIHLQCASKVEYFKTGRYGIYITSRDLKASDPDSKDDEISFKILRG
PQYGYLENVTTGGFIHEGYTQKDLNSKQILYVINPALEVTSDSLEFQVSDLTGNTALPQI
TLLLFMLFTFLLQLVDTGRCSSASASKRSDQVPWMRGKIVPFSADISPPEHGAVQREESA
VTPLKAERVQTRGDTPQTFGHSNPPKNRLRAVGSGKTYHGLVSLRVEDDTSPEKFGKKAE
VLVMNQGQQKLLAGSHRKVEILQADRKVLDIPPSFPKSCTPDLKGLLHFDQAIQKMFKCD
GISWKPWQPEFEDLSAKKCPTGWTNHDSHCYLLSSEHKVTWNTAARACKE
NT seq
5912 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttctttgaattggaagtgccatctatttgtatttctggttttattacttaaa
aatactgactccacatttattaaagctaatcatgggattaaagcgacaaaagggcagtct
gccttcctgtcagagaaacacctacaatttgatatcccaaaagagaaggatgcttgtaaa
atagaggttgttatgaatgaaccaatcacacaacgggtcggcaaactaataccacaggtg
tttgattgccattttcttcccaatgaagttaagtacattcacggtggttgtcccattctg
gatgaagaccaggtcatgctaaggctttacaggtttacagaaaccgagactttcacagaa
acctttcttcttcgtgtgacattaattgatgctgactgcaatataattaaactgggctcc
aagcctctggaagttccggagttttacggcctgtccaatgtgattgacaggaacgtgctt
atgtttgattatgacaggaagttaaatctggagtgcacggtgagagtagctaccctggaa
tctctcctgccagcccatggccagcttgtcattggggaactattaaaggaagaaccacat
ggagatcagcctcaaagcttttttccactccggccacagtctaaacacaaaggaggattg
aggtgtagagctgggaactgccagaaaggactgaagcagatcaagactaccaaagtgagc
tgtgaggagtttttagtgatgggactcaagtaccagcatctagatcctccttctcctgag
atagattatattgccatcaggctagatctgacggacagcagaagcagaactgtatataag
tcggaacatgcctggatcccagtacgaatcagaaatgccatccccaaccagattcccaag
gcagccttcatgtcgatgtttatcctggaggtggatcagtttatactgacccccatgacg
ataggcgctctggatgctgaggacagtgagactccccaaaacctgcttgtcttcaacatc
acaacaccaccgcctcagggttacatcacccacctgtctgaccacaccaagccaattacg
tctttcacatggcaagacttaaatgaaatgcttatagcttatcaaccacctaatagcagc
cacactgaaagaagaaattatgaggtggagtttgaggttcatgatttcttttttaagaaa
agtgcaccaatcatggtccacatctctatcaggactgcagacacaaatgctcctagggtt
tcctggaacatgggtcttaatctacttgaaggtcaatctcgaccaatcacatgggagcag
tttcagatagtagacaatgatgacatcagtgctgttcgactaatcactgtggatgggtta
cagcatggacgactcactgtgcggggtggaaaaggcttcatgttcacagtaagtgatatc
aaggctggtgtcgttcggtaccatcatgatgacagcgacaccacaaaggattttgttgtc
ttccggatttttgatggccgccacagcattcggcataaattccctataaacattctgcca
aaggatgacagccccccgttcctcatcacaaatgttgtgtttgagttgtgtgagggtcag
aacattctgatccagtgctccatgctacaagcctccgacatggactctagtgatgactac
attctcttcaacatcactaaaccccctcaggctggggaaatagtgaaacaaccaggccct
gagctcataggatacccagttaccagtttccttcaaagagacctctttaatgctatcatc
tactaccatcacctgggaggagaagtgtttgaagactcctttgagtttgttctgtcggat
agtcatgatccgccaaacctctcagaaccacaagctgtgattatacatattgctcctgtg
gatgaccagttgccaaaggaagtgcctggggtggtacggcaattggttgtcaaggaaaca
gagattgttcacctgaccaagagacaactgcactttatggacactgagtcacctgacaga
caactgacctatacaattactactactccgttttttacatcagtttatggtcgccctgat
gctggaagattatttttggtagacagcgtgcccaaacttgtgaaagatcccactgctctg
atgctgagatcatttacacagcatgctgtgaactacatgaaagttgcttacatgcctccg
atacaagatattggacctgatccacagcatgtccagttcattttttcagtcagcaaccaa
catggtggcactttaattgggatttgctttaatatcacagttctgccagtggacaaccag
gctcctgaggtctttacaaatcaactaaaagtagaagaaggtggggtaggtaggattact
gtggaccacttgctggtaaatgatgctgacacaaagccagaagacctcagggtgtggctc
cgaaggaaacccctttatgggcagttgcagctggatgggttttccatgaaagaaggagac
agcttcaccttggaggacctcaagacatttaaagctcgatatcagcatgatggttcagag
gttctgcgtgatgaaattttcctcacagctactgatggcattaattctgaagaatgtgta
ttacaaatcaaagttttgcctgtaaacgatgaacctccagtgattaagaatggcctaagt
cccatgatgcagtgcctagaaggagaggaagtggtcatcacctcagagtatctttatgct
atcgatgcagacagtgatgacatgaagctgtcttatataattgtccgacagccattttat
ggggtagtgcgcaaaagtggaatcattgtagatggcttctctcaagcagatattgtatca
gaattggtaacatacaagcacactggtagagaaattgggttaactccatgctttgacacc
atcaccgttgttatctctgatgatgaggcagaagcaggaaaaagttgttgctatgatggg
ctccaccatcctcaagtgccatttcatggttcatttcctgtatatgacctgaatatcact
gtcttccctgtggacaaccagcctccatccattgtcataggtgatatgtttgttgttgat
gagggttcatctgctgtcattactgttaaccatttgtgtgccactgatcctgacactcca
gtagatgagttacagtttgtgttggttgccccacctcagtttgggtatatagaaaacacg
ctgccttccccaggatttgagaagagcaacacgggcattagcatagcttcgtttaggctg
aaacacctgaaggatctacatatcaattatgtgcagtcccgacatcagaggatagaacct
actgccgatcagttcatggtgtatgttactgatggaaaacaccaatcagtggagacaccg
ctctacatcatcatccgcccaaccaatgatgaagtcccagagttcctagcaaggaacata
accgtacacgaaggccaaatgaaagaactggacccatcagttatcaatgcagtggacatg
gatattcccagagatcaccttgtatttacaataacaaagcaacccaggcatggaatgttt
atggaaggattgtatggaaatgacctaactcgctacaaacgactaattcacagtcatcaa
aaccatgcattattgttacatgattttaccatggatcaccttaagaatggaatgaagctg
atgtatatgcatgatgactctgaaaatatggctgacagtttcactgttcagctgtctgat
ggaaaacacaaagtccgcaaagctgtttcagtgaagatcattccacttaatgatgagaaa
cccattttggtaaaaaacagtggcatgcaggtttatatgggcgaaaccaggactatttcc
agcttggtcctgtcagctgaagacaaggacactccaagagaaggtgtttattatatgttt
gatagtgctccaaagcatggattacttcagctcaaggaaggtagggactgggcaacactt
agtgctggcatgaactgtactcaagataatattgatatgaatctcctgaggtttgtgcac
actggagccatggggtcaaaaggccaggatgacttcaagtttcacttgtgggataaggaa
aacagatccccattgcaaaccttctacatttcaattaaggacatggaaaagggagaaatt
gtgacatttatcaaacttctccgggtgtctaaaggagacagagtgcttttgaccacgaat
tttctgctagcagtagatggaagtgacagaccagaggagctgctttatgtaataacctca
ccaccaatgtatggtcaaattgagtatgttaactatcctggatcagttgttaccaatttt
agccaaatggatgtggcagctcaaacagtgtgctatgttcataagagcaaagcacatgct
actaaagacagctttagattcattgtcagcaatgggctgtcaacaaaaaatgggaccttt
gagatcatcattgaaaatgtggactgtgccctgcccacggtgtccaagaacaaagggatg
cgattggtggaaggcactatgatgatcatttctcctgaaatcttgcagctctctgaccct
gattcgccacctcagaacctcacctacctcatagcacagtttccccagtatgggcaactc
tacagaagaaaagccgtcctgaatcaacataacttcacccagcaagatattgataacatg
gatatagcctacagacatggaggtggagcctcccagattgacaggtttacctttattgca
tcagataaaagtaaccatggctttcttgtcaatggaaggatgcacacagaaccagtggtg
ttcacaattgaggtggatcggttgaacaagaccacgccgagaatcatccaccttcagtgt
gcctcaaaggtagaatatttcaaaactggacgttatggaatctatatcacgtcacgagac
ctgaaagcatctgaccctgacagcaaggatgatgaaatcagcttcaagatcttacgtggt
ccccaatatggttacttagaaaatgtgacaacaggtggatttattcatgaagggtacact
cagaaggatttgaacagcaaacagattctttatgtcatcaatccagcgctggaagtgacc
tcagacagtctggagttccaagtctcagatttgacagggaatacagctctacctcagatc
actttgctgctgtttatgctgttcacatttttgttgcagctcgtggatacaggtcgatgt
agttctgccagtgcaagtaaacgaagtgatcaggttccatggatgagaggcaaaatagtt
ccgttttctgctgacatttcaccacctgagcatggggcagtccagagggaggaaagtgct
gttactcccttaaaggcagagagagtgcagaccagaggggacacaccacagacatttgga
cactcgaatccaccaaaaaacagactaagggcagttgggagtggtaaaacttaccacggt
ttagtgtcccttcgagttgaggatgatacctctccagagaagtttggaaagaaggcagaa
gtgttggttatgaatcaaggacaacagaagttgcttgctggatcccataggaaggtagag
atcctacaggcagacaggaaagtgttggacatccccccatcttttcctaagagttgcaca
ccagatctgaaaggacttttgcattttgatcaggccatccaaaaaatgtttaaatgtgat
ggaatttcatggaagccatggcagccagagtttgaggatcttagtgctaaaaaatgtcct
actggatggaccaatcacgatagccattgctacctccttagtagtgaacacaaagtaact
tggaacactgcagcccgagcttgcaaggaaag
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integrated database retrieval system
