Latimeria chalumnae (coelacanth): 102352856
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Entry
102352856 CDS
T02913
Symbol
UBR3
Name
(RefSeq) ubiquitin protein ligase E3 component n-recognin 3 (putative)
KO
K11978
E3 ubiquitin-protein ligase UBR3 [EC:
2.3.2.27
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcm04121
]
102352856 (UBR3)
Enzymes [BR:
lcm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102352856 (UBR3)
Ubiquitin system [BR:
lcm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
102352856 (UBR3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRT6_C
zf-UBR
MTR4-like_stalk
Motif
Other DBs
NCBI-GeneID:
102352856
NCBI-ProteinID:
XP_005997696
Ensembl:
ENSLACG00000014244
LinkDB
All DBs
Position
Un
AA seq
1860 aa
AA seq
DB search
MAAFVLRRDKKTTAAHLKAELNRSDNSQGVHQLNELLDSVLNPEKPPGDNEALEWCKSLL
AGGESFEEFCKTVRSYDNATLCGLVWTANFVAYRCRTCGISPCMSLCAECFNNGDHTGHD
FNMFRSQAGGACDCGDSNVMRDSGFCKRHRSTSSASIPSVPKELLLMSERILPRVIFSLI
QYLREGYCEPDLTSERDLQKVLQPLEPLISFLEELTKMGGAMRCVLTQVLANQQSYKDLS
SGPGDNVYAKKNFEKYLTALKGSGLVSSKDKSATGILEQAAGTSSLENQGGAAASRPMDS
SDEEEQDSTQVLGKRKRVKLSSSTKDPSIMDVLKHKCFLEELLFWTVKYEFPQKMVTFLL
NMLPDQEYKIAFTKTFVQHYAFIMKTLMRSHESDTMSNRIVHISVQLFSNEELARQVTEE
CQLLDIMVAVLLYMMESCLIKSELQDEENNFHVVVNCGEALLKNNTYWPLVSDFINILSH
QSVAKKFLEDHRLLQKWMNFVSFFQGMNLNKRELNEHVEFESQTYYAAFAAELEACAQPM
WGLLSHCKVKETQEYTRTVVRCCLDALQYWFETINFVDEPTPNQVTFHLPLHRYYAMFLS
KAVKCQELDLDSLLPDQEMLMKLMVHPLQIQSCLSEIHSNMWVRNGLQIKGQAMTYVQSH
FCNSMIDPDIYLLQVCASRLDPDYFISSVFERFKVVDLLTMASQHQNTALDAEHERPMLE
GALTFLVILLSLRIHLGMTDDEILRAEMVAQLCMNDRTHSALLDLIPENPNPKSSIVPGS
YSFETMLSAVADFKAPVFEPGGSMQQGMYTPKAEVWDREFDPIMVILRTVYRRDVQSAMD
RYTALLKQTGKFSGNPWPPYKERTPLHPSYKGLMRLLHCKTLHIVLFTLLYKITMDHQKM
SEHVLCMVLYLIELGLENVLEEEADEVDSSSQENCHDSWFPKANLVFNLHHGINYVRVKV
PETAPEVKREPPASTSSGSLTSSQSSRRSSAFQRENSGTAQVFSLVAERRKKFQEIINRS
SSEANQVVRPKVSALKWSAASSAPPLTTAILEIGESMLSLLIKLHHKLSGKQNSYYPVWL
DDSEKIVKSDSLKYSHGDGITAIERILAKAAAHSRQNKRSIEEICQKVSPPVPPKKTSPA
DKKAMDKEERRQKARERQQKLLAEFASRQKSFMETAMDIDSPDPDVAMEIGSSDHHISEA
VYDCVICGQSGPSTEERPAGLVVLLQASSVLGHRRNCTEPKKLPTSEEEQIYLEDTCAAA
HDVRISMLQRYFKDSSCLQSISIGWEGGVYVQTCGHTLHIDCHKSYMESLRNDQVLQGFS
VDKGEFTCPLCRQFANSVLPCYPGKCVEKSLWQCQSNRSLQVLVKEVEELQEQLGTFPVS
ISSETNLSKEMESVMKDIKSTTHKKYTDYSKTPGSPDNDFLFMYSVVRTNLELELVHRGG
NLCSGGATTAAKRSCLNQLFHVLAMHMRLYSIDLAFNPWLRLTQMRQDKDTQLCSEEKPE
VPLLYRDASSLLLILILTMPQPLHKEHFTCIVKVLYTLLYTQAIAALSVKFSHEERLAWK
DSGALKKHKGNPEKSWEVLLSHVISKLSEGNLYYDEDTEQTLMITSSIWSPHSIQYSLQQ
FCLPFLRITSLLQHHLFGDDLPSCQEEEEFTVLANCLGQLPSHFQTSHDFDSASCLSWVV
PAFDIISLWCSEVTSFANMHAKQAKNLLIQNTQWNSSRLLQLPENYNTIFQYYHRKSCVV
CTKVPKDPALCLVCGTFVCLKGACCKQQSYCECVLHSQNCGAGTGIFLLINASVIIIIRG
HRFCLWGSVYLDAHGEEDRDLRRGKPLYLCEERYQVLEQQWVSHTFDHINKRWGAHYNGL
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtttgtactgcgccgggacaagaaaactacggctgcccacttgaaggctgag
ttaaatcgctcggacaatagtcagggggtccaccaactcaacgagctgttggatagtgtc
ttgaacccggagaagccgccgggagacaacgaggccctggagtggtgcaagagcctgctg
gctgggggcgagagcttcgaagagttctgcaagacagtgcgctcgtatgataacgccact
ctgtgcggactggtctggacggccaacttcgtggcctaccgctgtcggacctgcggcatt
tccccctgcatgtcactgtgtgccgagtgcttcaataacggagatcacacgggccatgac
ttcaatatgttcaggagccaggctggcggggcctgtgactgcggggacagtaatgtcatg
agagatagcggattttgtaaaagacatcggtcaacttcaagtgcaagtattccttctgtc
cccaaagaactactgctgatgtcagaacgaattcttcctcgagttatcttttcccttatc
cagtatttaagagaaggctattgtgaaccagatctgacatcagaaagagaccttcagaaa
gtacttcagccattggaacctctgatttccttcttggaagagctaacgaagatgggagga
gctatgcgctgtgtcctcacccaggttctcgctaaccagcagtcttacaaggacttgagc
tctggtcctggagacaacgtgtatgcaaagaaaaattttgaaaaataccttacagccctc
aagggttctggactagtatcttctaaggataagtctgctactggtatactggagcaagca
gctgggacaagcagtttagaaaatcaaggtggtgcagcagcatcaagaccaatggattcc
tctgatgaggaggaacaggatagcacccaagtactgggcaaacgaaagagagtcaagctt
agcagcagtaccaaagatccatcaattatggatgttcttaaacataaatgttttctagaa
gaattattgttttggacagtaaagtatgagtttccacaaaagatggtaaccttcctttta
aacatgttaccagatcaagaatataagattgcatttactaagacatttgttcagcattat
gccttcattatgaaaacattgatgaggagccatgaatccgacactatgtccaacagaatt
gtacatatcagcgtccagttatttagtaatgaagagttagcacgacaggtaacagaagaa
tgccagttgctggatatcatggttgcagtcctattgtatatgatggaaagctgccttatt
aagagtgagctgcaagatgaagaaaacaattttcatgttgtggtaaactgtggtgaagca
ctactgaagaataacacctactggccactagttagtgactttattaacatcctttcacat
caaagtgttgcaaaaaaattccttgaggatcataggcttctacaaaaatggatgaacttt
gtttctttttttcaaggtatgaatttaaataagcgagaactaaatgaacacgtagaattt
gaatcccaaacctactatgcagcatttgcagcagaactggaagcttgtgcacagcccatg
tggggacttctgtcacactgcaaagtgaaagagacacaggaatatactagaactgttgtc
aggtgttgtttggatgctctacagtattggtttgaaaccatcaactttgtagatgagcca
acacccaatcaagttacttttcatttgcctcttcatcgctactatgctatgtttctaagc
aaggccgtcaaatgccaggaacttgatctagattcgttgttaccagatcaagagatgctt
atgaaacttatggttcacccattgcaaattcagtcatgcctttcagaaatccacagtaat
atgtgggttaggaatggactacagattaaaggacaggctatgacgtatgtgcagtcccat
ttttgtaactccatgatagacccagatatttatttactacaggtgtgtgcttctaggctt
gatcccgactactttatttcgtcagtttttgaaagatttaaagttgttgatttactaaca
atggcatcacagcatcaaaacacagctcttgatgcagaacatgagagaccaatgcttgaa
ggagccttaacttttcttgttattctgttgagccttcgcatacatttaggaatgactgat
gatgagatcctgagggcagagatggtagctcagctctgcatgaatgaccggactcacagt
gcattattggacctcattccagaaaaccccaaccctaagagcagtattgttcctggcagc
tatagctttgaaacaatgctgtcggctgttgctgattttaaagcacctgtctttgaacct
ggaggttccatgcaacagggaatgtatacacccaaagctgaagtttgggatagagagttt
gacccaatcatggtaattcttcgaaccgtttaccgcagggatgttcagtctgcaatggac
agatatacagcattattaaaacagactggaaaattttctggtaacccttggccaccatat
aaggagagaacaccgctccatcccagctataaaggtctaatgaggctgttgcactgtaaa
acactacatatagtgctttttacacttctttataagataaccatggatcaccagaaaatg
tctgagcatgttctttgtatggttttatacctaattgagcttggtctagaaaacgtattg
gaagaagaagctgatgaagtggactccagtagccaggaaaattgccatgacagctggttc
cctaaagctaacttggtatttaacttacaccatggcatcaattatgtaagagtgaaagta
ccagagaccgctccagaggttaagagagaaccacctgcgagtaccagttcaggcagttta
acttcctcacagagctcaagacgatcctctgccttccagagagagaattcaggtacagct
caggttttcagcttggttgcagagcgtaggaagaagtttcaggagatcatcaaccgtagc
agtagtgaagcaaaccaggtggttcggcccaaggtgtcagctctgaaatggtcagcagcc
agctctgctcctccgcttacaacagccattctggaaatcggagaaagcatgctgtccctg
ctgattaaacttcaccacaagctctcaggaaagcaaaactcttattatcctgtctggtta
gatgattcagagaagatagtgaagtctgactcactcaaatactcacatggtgatggaata
acagctatagaaagaattttggcaaaagcagcagcccatagccgccaaaacaagcgtagc
attgaagagatctgtcaaaaagtatccccacctgtaccaccaaaaaagactagcccagca
gacaagaaggctatggataaagaggaaagaagacagaaagcaagagagagacagcagaag
ttacttgcggagtttgcttcaaggcagaaaagtttcatggaaactgcaatggatattgat
tctcctgatcctgatgtggcaatggagataggctcttcagatcatcacatttcggaagca
gtatatgattgtgttatttgtggacagagtgggccttctactgaagaacgacctgcagga
ttagtagttttattgcaagcatcatcagtcctggggcaccgtcgtaattgcactgagcca
aaaaagctgccaaccagtgaagaggagcaaatttaccttgaggatacttgcgctgctgca
catgacgtcagaatctcaatgttacagcgctacttcaaggacagctcctgtctgcagtca
atatcaataggctgggaaggaggtgtctatgtccaaacatgtggccacactttacacata
gattgtcataagtcctatatggaatcattaaggaatgatcaggttcttcagggtttttca
gtggacaaaggagaattcacctgccctctctgcagacagtttgccaacagcgtcctcccc
tgttatcctggaaagtgtgtagagaaaagcctttggcaatgtcagagtaacaggagcctg
caagtccttgttaaagaggtggaagagctacaagaacaactgggaacattcccagtaagc
atcagttctgaaacaaaccttagtaaagaaatggaatctgtgatgaaggatataaaaagt
accactcataagaagtacacagactacagcaagactcctggttctccagataatgacttt
ctgttcatgtattctgtagttaggacaaacttggagctggagttagttcatcggggagga
aatttatgctcaggaggagcaactactgctgcaaaaagatcctgcttaaaccagctgttt
catgtgttagccatgcacatgcgcctttacagcatcgacttggcattcaacccctggctg
cgtcttacgcagatgaggcaggataaagatacacaattgtgcagtgaagaaaaacctgag
gtgccattgctataccgagatgcatcctctctcctgcttatccttattttaactatgcca
cagcctttgcacaaagaacactttacttgcattgtgaaggtactttataccttgttgtac
actcaagctattgcagcactttctgttaaattcagccatgaagagagattggcctggaag
gattcaggagccctcaaaaagcataaaggcaaccctgaaaaatcttgggaagtattgctc
agtcatgtgattagtaaactttcagaaggaaacttgtactatgatgaggacacagaacaa
acattaatgatcacttccagcatctggtctcctcactcaatacaatatagtctgcagcaa
ttttgcttgcctttcctcaggatcacgagccttcttcaacatcacctttttggggatgat
ttgcctagttgccaggaagaggaagaatttactgtgcttgccaactgtctgggtcagctg
ccatcacattttcaaacatcacatgattttgacagtgcctcttgtctttcttgggtagtc
ccagcatttgacataatatccctgtggtgctcagaagtgacttcatttgcaaacatgcat
gcaaaacaagcaaagaatttgcttatccagaatactcagtggaattcatcacgccttctc
cagttacctgaaaattataacaccatcttccagtactatcacagaaagtcctgtgttgtc
tgcactaaggtgcctaaggatcctgccctttgcctagtttgtgggacttttgtctgccta
aagggtgcatgctgcaaacagcaaagctattgtgaatgtgtactgcattctcagaactgt
ggggctggaacagggatattcctattaatcaatgcatcagtaatcattatcatacgaggt
catcgtttctgcctgtggggttctgtctacctagatgcccatggagaggaagaccgagac
ctcaggcgcggtaagccactgtacttgtgcgaagaacggtaccaggtcttggagcagcag
tgggtatctcacacatttgatcatataaataaaagatggggggcacattacaatggattg
taa
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integrated database retrieval system
