Latimeria chalumnae (coelacanth): 102353559
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Entry
102353559 CDS
T02913
Symbol
GTF2H2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03022
Basal transcription factors
lcm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102353559 (GTF2H2)
09124 Replication and repair
03420 Nucleotide excision repair
102353559 (GTF2H2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcm03021
]
102353559 (GTF2H2)
03400 DNA repair and recombination proteins [BR:
lcm03400
]
102353559 (GTF2H2)
Transcription machinery [BR:
lcm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102353559 (GTF2H2)
DNA repair and recombination proteins [BR:
lcm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102353559 (GTF2H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
IBR
VWA
C1_2
HscB_4_cys
DZR_2
Motif
Other DBs
NCBI-GeneID:
102353559
NCBI-ProteinID:
XP_006004446
Ensembl:
ENSLACG00000011940
UniProt:
H3AV89
LinkDB
All DBs
Position
Un
AA seq
393 aa
AA seq
DB search
MDDEPERAKRWEGGYERTWEVLKEDESGSLKATVEDILFKAKRKRDFRYHGQVRLGMMRH
LYVVVDASRTMEDQDLKPNRLTCTLKLLEQFVDEYFVQNPISQLGVIVTKNKRAEKLTEL
AGNPRKHTAALKKAVDTNCLGEPSLYNSLSLAMQTLKHMPGHTSREVLIIFSSLTTCDPA
NMYELIKCLKAIKIRVSVIGLSAEVRVCTVLTRETGGTYHVILDESHFKELLMYHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDFKPSFSMAHLDSSSEPGLSLGGYFCPQCRAKYSE
LPVECKVCGLTLVSAPHLARSYHHLFPLDAFKEMLLEEHRGERYCQGCQKELKEQNVYTC
TVCQNVFCVECDLFIHESLHCCPGCIHNHPTGV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaacctgaaagagccaaacgctgggaagggggatatgagcggacatgggag
gttcttaaagaagatgagtctgggtctcttaaggctacagtggaagatattctatttaag
gcaaagaggaaacgagacttcaggtaccatggacaagttagacttggaatgatgcgtcac
ctgtacgtggttgtcgatgcatcaagaactatggaagatcaggatttaaagcccaataga
cttacgtgtactttaaagttgttggaacaatttgtggatgagtactttgttcaaaacccc
atcagtcagcttggtgttattgtgaccaaaaacaagagagctgaaaagctgacggaactt
gcaggaaacccgaggaagcacacggccgctctgaagaaagcagtagatacgaattgcctt
ggggaaccatcgctgtataattcactaagtttggccatgcagactctcaagcatatgcct
gggcacaccagtcgtgaagtcttgatcatctttagcagcctcacaacctgtgatccagcc
aatatgtatgagctgattaagtgtttgaaggctattaaaataagagtatccgtaattggc
ctttcggcggaagttcgggtctgcactgttctcactcgtgaaactggaggaacctaccat
gttattctagacgaaagccactttaaagagctgctcatgtatcacgtgagtcctccacca
gccagctcaagctccgagtgctctcttattcgcatgggttttcctcagcacactattgcc
tcattatcagatcaagattttaaaccctcttttagcatggcgcacctggatagtagtagt
gaaccaggtctctcgctggggggatatttctgtccacagtgtagagcgaaatacagtgaa
ctccctgtagaatgcaaagtctgtggtcttacgttagtgtctgcgcctcacctggcaagg
tcttaccatcatctgtttcccctggatgcttttaaagagatgctgctggaggaacatcgt
ggcgaaaggtattgtcaaggctgtcaaaaggaattaaaagaacaaaatgtttatacatgc
acagtgtgtcagaatgtgttttgcgtggagtgtgatctgtttattcatgagtccctacac
tgctgtccaggctgcattcacaaccatcccacaggagtttga
DBGET
integrated database retrieval system
