Latimeria chalumnae (coelacanth): 102356800
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Entry
102356800 CDS
T02913
Symbol
CHD1
Name
(RefSeq) chromodomain helicase DNA binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcm03021
]
102356800 (CHD1)
03036 Chromosome and associated proteins [BR:
lcm03036
]
102356800 (CHD1)
Transcription machinery [BR:
lcm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
102356800 (CHD1)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
102356800 (CHD1)
SLIK complex
102356800 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
Motif
Other DBs
NCBI-GeneID:
102356800
NCBI-ProteinID:
XP_014352852
Ensembl:
ENSLACG00000018415
LinkDB
All DBs
Position
Un
AA seq
1656 aa
AA seq
DB search
MSVSGSRSSSSSSSSSSSSSSSSGSSSEEDRAVNSDVQSESDYEPNHKVKSRKPTNRKKA
KNGKKSKGQTDSSDEDDDDYDKRGSRRQATVNVSYKEDEEMKTDSDDLLEVCGEDVPQPE
EDEFETLERVMDSRCGRRGATGASTTIYAVEADGDPNAKFDPLKEPKETQYLIKWKGWSH
IHNTWESEETLKQQNVKGMKKLENYKKKDQETKRWLKSASPEDVEYYNCQQELMDDLHRQ
YQIVERIIAHSNQKSEAGFPDYLCKWQGLPYVECSWEDGALITRKFKACIDEYMSRNQSK
TIPFKDCKVLKQRPRFVALKNQPSYIGKSDILELRDYQLNGLNWLAHSWCKGNSCILADE
MGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQIWAPLMNAVVYLGDISS
RNMIRTHEWMHLPTKRLKFNILLTTYEILLKDKSFLGGVNWAFIGVDEAHRLKNDDSLLY
KTLIEFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGRGREFGYASLH
RELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAVQKQYYKWILTRNYKALSKGAKGSTSG
FLNIMMELKKCCNHCYLIKPPEDNEFYNRQEALQHLIRSSGKLILLDKLLVRLRERGNRV
LIFSQMVRMLDILAEYLKSRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAG
GLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEEIIERAK
KKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELAAILKFGAEELFKESEGEEQEP
QEMDIDEILRRAETRENEAGPTSVGDELLSQFKVANFTTMEEDDIELQPEKNTKNWDDII
PEEQRRRIEEEERQRELEEIYLLPRMRKCAKLVSFNGSEGRRSRNRRYSGSDSDSLIERK
RPKKRGRPRTIPRENIKGFSDSEIRRFIKSYKKFGGPLERLDAIARDAELVDKSEVDLRR
LGELVHNGCIKALRESSSGQERGGGGRRGKVKGPTFRISGVQVNAKLVISHEEELAPLHK
SIPADAEERKRYTVPCHTKAAHFDVDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLHLTH
KILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQRLSGMGNSRKRKPRTKKSKAVKP
VKIQEVIKSDSSHPPSEKSSEEEEDDDTQEELPPVKPPNKKIKLEKENEETPDPELIKKE
AEEKKEVKENRRELKEKKDDKKEKEKEVKEKKEVKTRDAVQEEKVTEVKIEIKDKTKKPS
EGDVPVHITAGSDPVAISDESEELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLE
HTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQ
ESSQQQNDLNISSNVNTHGIKHTDVERLKENSHHDESSRDSNSSDRHHSSQYHDHHKDRH
QGDSYKKSDSSRKRSYPAFSNGKDHRDRDHYRQDNRYYGEKQHRKLDDHRSRDHRSGLEG
SLKDSRPHSDHRSHSDHRSHLDHRSSSEYSHHKSSRDYRYHSDWQMDHRASGSGPRSPLD
QRSPYDARSPLGHRSPFEYSSDHKATPEQAWSGRKT
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtatcggggtctcggtcatcatcatcgtcgtcgtcatcatcatcgtcatcatct
tcaagctcaggctcgtcgtctgaagaggatagagctgtaaatagtgatgtacagagtgaa
tcagactatgagccaaaccacaaggttaaaagcagaaagcccactaaccggaaaaaagca
aagaatggcaaaaagtcgaaagggcagactgactcgtctgatgaagatgacgacgattac
gataaaagagggtctcgtcgtcaggcaaccgttaatgtcagttataaagaagatgaagaa
atgaaaacagattcagatgatttgcttgaggtgtgtggggaggatgtcccacagcctgaa
gaagatgaatttgaaacactagaacgggttatggacagtcggtgtgggcgaagaggagct
actggagcctctaccacaatatatgcagttgaggcagatggtgatcccaatgccaagttt
gatccactgaaggaacccaaagagacccagtatctgataaaatggaaagggtggtctcat
atccacaacacgtgggagagtgaagaaacgttaaaacagcagaatgtaaaaggaatgaaa
aagctggaaaactacaagaaaaaggatcaagagacaaaaagatggttaaaatcagcatcc
cctgaagatgtagaatattataactgccagcaagagcttatggacgatttgcacagacaa
tatcaaatagtagaaagaattattgctcactccaatcagaaatctgaagctggttttccg
gattacttgtgcaaatggcagggtctgccttacgtggagtgtagctgggaggatggggcc
ctgattaccagaaagtttaaggcttgcatagacgagtatatgagcagaaaccagtcaaag
accattcctttcaaggactgcaaggtcttaaagcaaaggccaaggtttgttgcactgaag
aatcagccttcctatattggaaagagtgatatcctggagctccgagattaccagttaaat
ggcttgaactggctggcacactcctggtgcaaggggaacagctgtatcctggcagatgag
atgggtcttggaaaaacaattcaaaccatctccttcctcaactacctatttcatgaacac
cagctatatggaccttttctgttggttgtaccgctctccacactcacttcctggcaaaga
gaaatacagatatgggcacctttaatgaatgctgtggtttacttaggtgacataagtagc
agaaatatgataagaacgcatgaatggatgcatcttccaacaaagcggctaaaatttaac
atcctgttgactacttatgaaattttactaaaagataagtcattccttggtggtgtcaac
tgggcatttataggagtagatgaagctcatcgcttaaagaatgacgactccctcctttac
aaaaccttaattgagtttaagtcgaaccaccgcttgcttatcactggaacccctttgcaa
aactcactaaaagaactctggtccttgctgcacttcatcatgccagaaaaattctcatct
tgggaagactttgaagaggaacatggcagagggcgagagtttggatatgcaagcctacac
agagagctggagccatttttgctgcgaagagtaaagaaggatgtggaaaagtctctgcct
gccaaggtggagcagatcctgcgagtcgagatgagtgcagtgcagaaacagtattacaag
tggatattaaccaggaattacaaagccctgagcaaaggcgccaagggcagtacctcaggc
tttctgaacattatgatggagctgaagaaatgttgcaaccattgctacctcattaaacca
cctgaagataatgaattctataacagacaggaggccttacagcatttaatccgtagcagc
gggaagcttatccttctggacaagttactagtacgtttgcgagagcgaggaaatagagtc
ctcatcttttctcagatggtgaggatgctggacatcctggcagaatatttaaagagcaga
cagttcccctttcagagacttgacgggtcaattaaaggggagttaagaaaacaagcactg
gaccattttaatgcagaaggatcagaggatttctgctttttgttgtccacaagagctgga
gggttaggtataaacttggcatctgcagatactgttgtcatttttgattcagactggaac
ccacaaaatgatttgcaggctcaggctagagcccacaggattgggcagaaaaaacaggtt
aatatttatcgattggtaacaaagggatcagttgaggaggaaattattgaaagagccaaa
aagaagatggtattggatcatctggtgattcagagaatggatacaacagggaaaacagta
ctacacacaggctcaactccttcaagttctaccccattcaacaaggaagagctggcagct
atcttaaagtttggtgctgaagaacttttcaaagagtctgaaggagaagaacaggaaccc
caggaaatggacatcgatgaaatcttgcggcgggctgaaacgcgtgaaaatgaggcaggt
ccgacgtcagttggtgatgaattgctttcacagtttaaggtagcaaacttcactactatg
gaagaggatgatattgagcttcaacctgaaaaaaatacaaagaattgggatgatatcatt
ccagaggagcagaggcgaagaatagaagaagaagaaaggcaaagagagcttgaggagatt
tatttgcttccacgaatgcgaaagtgtgctaagctggtaagctttaatggaagtgagggc
aggcgcagcaggaatcggcgatactctggttcagatagtgattctctcatagagaggaaa
cggccgaagaaacgaggaagaccgcgaacaatcccgcgggaaaacataaagggatttagt
gattctgaaatacgaaggtttatcaaaagttacaagaagtttggtgggcctcttgaaagg
ttagatgccattgcacgagatgctgagctggtggataaatctgaagtggacctcagacgc
cttggagaattggtgcacaacggctgtattaaagctttaagggagagctcctcaggacaa
gaaaggggaggaggaggcagacgtggtaaagtgaaaggaccaacatttcgaatctcagga
gttcaggtgaacgctaaattagtcatctctcatgaagaggaactcgcacccttgcacaaa
tctattcctgcagatgcagaggaaagaaagaggtacaccgtcccctgtcacactaaagca
gctcattttgatgtggactggggcaaggaggatgactccaatctcttaataggcatttac
gaatatggttatggcagctgggaaatgattaaaatggaccctgacctccacttaacgcac
aagatactaccagatgatccagataagaagcctcaggcaaaacagttgcagacgagagca
gactacctcattaaattgctcaacaaagaccttgcaaggaaagaagcacagaggctatct
ggcatgggtaattcaagaaagagaaaaccaaggactaagaagagtaaagcagtaaaacct
gtgaagatacaagaggtgataaaaagtgattcctcccatcctccttcagaaaaatcatct
gaggaagaagaggatgatgatacccaggaagagctccctcctgtgaaacccccaaataag
aagatcaaattggaaaaagaaaatgaagaaacgccagatcctgagttaatcaaaaaagag
gctgaggaaaagaaggaagtaaaagaaaataggagagaactaaaggagaagaaagatgac
aaaaaagaaaaggagaaagaagtaaaagaaaagaaagaagtcaaaacaagagacgctgta
caagaagaaaaggtaactgaagtaaaaatcgagattaaggataaaaccaagaagccatca
gaaggagatgttcctgttcatatcactgcaggtagtgatcctgttgccatctctgatgaa
tcagaggaacttgaccagaaaaccttcagtgtatgcaaggaaagaatgagacctgtaaag
gctgccctgaagcagttggacagacctgagaagggcctatctgagagggagcagctggag
cacaccagacagtgcctgatcaaaattggagaccacatcactgagtgcttgaaggagtac
actaaccctgaacaaataaaacagtggagaaagaatttgtggattttcgtttcaaagttc
acagaatttgatgctagaaagctgcataaactgtacaaacacgcaatcaagaaaagacaa
gagagctcacagcaacagaatgacttgaacatcagcagcaatgtgaacacccacggtatt
aagcatacagatgtagaaagactaaaggagaattctcaccacgatgagagcagcagggac
agtaattcttctgacagacatcactcatcgcaatatcacgatcatcataaagatcggcat
cagggagattcttacaaaaaaagtgattcctcaagaaaaaggtcgtatccagctttcagc
aatggcaaggatcaccgggacagagatcactacaggcaagataacaggtactacggtgaa
aagcagcacaggaagttggatgaccatcgaagtcgagatcacaggtctggcctggaaggc
agcttgaaagacagcaggcctcactcagatcaccgctcccattcagaccaccgatcccac
ttggaccaccgatccagttctgagtatagccaccataaatcttccagggattataggtac
cactcagactggcaaatggaccacagagcctctggcagcggccccaggtccccactggac
cagaggtcaccttacgatgccaggtctcctttaggacacagatctccatttgagtactct
tctgatcacaaagctacccctgaacaagcctggagtggtcgtaaaacataa
DBGET
integrated database retrieval system
