Larimichthys crocea (large yellow croaker): 104918968
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Entry
104918968 CDS
T04659
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
KO
K14316
nuclear pore complex protein Nup121
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104918968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104918968
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104918968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
104918968
NCBI-ProteinID:
XP_010729164
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Position
XXII:19779721..19789448
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AA seq
1166 aa
AA seq
DB search
MRVLRWRAAAMSPREKHLALLSALGVLGFALYYSPSFLYATLILAVCCVVCYYHSGEPLP
ARLGLNPRAGPNVPAVLRRWLWGFGVTGVSVPARGRTNTSNKTEHREPEGHFRKRFAETG
IYRRESLESDSFLFSPRDFLMGSYIGKPESPTADPGRPRTGRNPREQLREKLSRPNHAVY
TPNRRLSFAGEPLGAVGRFTITPQRHYPLQQPGVSSVGVLPPVKWDGFRKKNILSPRNSP
AALSPVTVKIARPDHHSSPSFDHLSCASLPRAPADPCSRESVLKVLKESRKREVEDEELN
FTTEQRSKRRRNDSGGSAHSAFGPILPNGTPSQLVPKPGSLKRGMASLMEESIMKRSRTS
SISSGSGAHAPRGTPGTGRNPIHSSYSSTLGLSQRKKRSAPSSPLSSPGSSRSQTPDGAS
KRQREDDGQSPSSASSVRSNQAASEKAPVTSKLTPVPKVPVTTSADSTGSGGKRKRKIQL
VSSHRDDQISLPPPPELGYAITVKDLDEEKKAAISKIQKVLETPAPEPEKSVSPPATTST
QLPSTISSTSTTTLSSLLAAPLPTASSSAIPVINLDPSPASSVSTAPAASNPLLEALKMK
SSIPASSTSVANTTTVSATTPVQPSGLNLKASTTVAPQLPPASQSQSSSAGGEQPSAFTQ
VLGQVTKASSGTPPVAGASLFGLASQINTPTASSASNLVTATAPASSSGPVSNTNPLLTS
GFKPIFAVTTTSSSATSIPESKPSVQSFKPIFGATTAGSGFGQPSPLTTTNPASTASLSS
TPSLFGSTSSTTVAPSIFPGMTNAPTGTASTGSITTTQPAAQPVVKSLFGSTTAASAQAP
NTGSTFQFGTATTTTAAAPAPAAATTTSSNSAFAFGATQPDPQGANTKVFAFGQTAPSQN
TTTASFGGFAMASTASTTAAATTQSTFTFGKSSFQAPAAQSTFGSTASTAATAPPPPKPF
TFGGSAASSTPASNTPPPPFPFGSAAVSTATSFGTPAKPAFGASSSGFAFGATTAPSAAP
SAAPSFGASTQTQSSSTGTFTFGSAAPQQAPTGPAQPAPGGFNFGAGMPCPQFGTPVSNN
PAPQMGSFNFGAAANDKPAFGTSTPSFGQSAAVGPIPFGSPGTPVQGFNAVPFGSPATPS
FSIGAGSKPSGARQRLQARRQHNRKK
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcctccggtggcgcgctgccgccatgtcacctagagagaaacatttagcgctt
ctctcagctttaggcgtgctcggctttgctctttactacagcccttcttttctttacgcc
actctaattctcgccgtttgttgcgttgtgtgttactatcacagcggagagccgcttccc
gccaggttaggtttgaatccgcgggctgggcctaacgtgccggccgtgctccggcgctgg
ttgtggggcttcggggtgaccggcgtgtcggtgcccgcgcgggggaggacgaacactagt
aacaaaaccgagcaccgggaaccggagggacactttagaaagaggttcgccgaaactggg
atttacaggagggagagcttggaaagtgactcctttcttttcagccctcgggatttcctc
atggggagttacatcgggaaacccgaaagtccaaccgcggaccccgggaggccgaggaca
gggagaaacccccgagaacaactgcgggagaagctgtccagacccaaccatgctgtctat
accccgaacaggaggctgtcattcgctggggagccactgggtgcagtgggcaggttcact
atcaccccgcagcgtcactaccccctgcagcagccaggtgtgtcatcagtgggagtccta
cctcctgtcaagtgggatggcttcaggaagaaaaacatcctcagcccccgcaactccccg
gctgccctcagcccggtcactgtgaagatcgcaaggcctgaccaccacagcagccccagt
ttcgaccatctgagttgtgcaagcctccccagggccccagcagacccctgctccagagaa
agtgtcctcaaggtgttgaaagaaagccgcaagagagaagtggaggacgaggagttaaac
ttcacaactgagcagagaagcaaaagaaggcgtaacgacagcggtgggagcgcacactct
gcttttgggcccattttacccaatggaacaccatcgcagctggtccctaagccaggaagc
ctgaaaagagggatggcctcactgatggaggagtccatcatgaagaggtctcgcacatcc
tccatcagctctggcagcggcgcccatgccccgagaggaaccccaggcaccgggagaaac
cccatccacagctcctacagctctacactaggcctcagccagaggaagaaacggtcagca
cccagctcccctctgtccagccccggatcatctcgttctcagactccagatggagcctcc
aaaagacagagagaggacgacgggcagtctcccagctcagcatcctccgtgaggtcaaac
caggcagcttcagaaaaagcacctgttacttccaaattgactccagtccccaaggtccca
gtcactacctcagcggactctaccggtagtggtgggaagagaaaacggaagatccagctg
gtttccagccacagagacgatcaaatctctctgcccccgcccccagagctgggctacgct
atcactgtgaaagacctagatgaagagaaaaaggctgccataagcaagattcagaaggtc
ctggagacacctgctccagagccagagaaatctgtctctcccccagccaccacttccacc
cagcttccctccaccatcagctctactagcaccaccaccctgagcagcctcctggcagct
cctctgcccacagcctccagctctgccatcccagtcatcaacctggatcccagccccgcc
agcagtgtcagcacagcacctgcagcctccaacccactgctggaggcactgaaaatgaag
agcagcattcctgcgagctccacatctgttgcaaacacgactacagtgtctgcaaccaca
ccggtacaacccagcggcttaaatctgaaggcttcgactacagtggccccacagctccca
cctgcctcccagtctcagtcctcctctgctggtggggagcagccctctgcctttactcag
gtgctgggtcaggtcaccaaggcttccagtggcactccacctgtagcaggagcaagcctg
tttggactggcgagccaaatcaatactcctactgcttcttcagcctctaacctggtcacg
gctactgccccagctagcagctcagggccagtaagtaacaccaaccctctgctgacttca
gggttcaagcccatctttgctgtcaccaccacctcctcctcagctacatcaatcccagag
agcaaaccttctgtccaaagtttcaagcccatctttggagccaccactgccgggtctggc
tttggacagccttcaccccttaccaccaccaacccagcctccacagcttctttaagtagt
acaccctcactgtttggatcaacaagcagcaccacagttgccccctccatttttcctggc
atgaccaacgcccccactggcacagcctccactggctccatcaccaccacacagcctgca
gcccagccagttgtgaaatccctctttggaagtaccaccgcagcttcagcgcaggcccct
aatacagggagcacgtttcagtttggaactgctaccaccaccactgcagctgcccctgcc
cctgccgctgccaccacaacctccagcaacagcgccttcgcatttggtgctacacagcca
gaccctcaaggtgccaacacgaaggtattcgcctttggccaaacagcacccagtcagaac
acaaccactgcttcatttggaggctttgccatggccagcacagcctccaccactgctgcc
gccaccacccagtccacgttcacctttggaaagtcatcgtttcaagcgccagcggctcag
tcaaccttcggatccacagcatcaacggcagcaacagcaccaccaccaccaaaaccattc
actttcggaggcagcgcagcgtcatccacgcctgcatctaacacccccccaccccctttc
ccatttgggtcagctgctgtctccacagcaaccagcttcgggaccccagctaaaccagcg
tttggagccagctcctctggttttgctttcggtgccaccactgccccgtcagctgcaccc
tcagctgcaccgagctttggtgcatcaacgcagactcagagctcctccacaggcaccttc
acatttggcagtgctgctcctcagcaggctcccactggtcctgctcagcctgctcccggt
ggatttaactttggagctggtatgccatgtccccagtttggaacaccagtctccaataat
cctgcaccacagatgggaagcttcaattttggggctgctgctaatgacaaaccagctttt
gggacgtctaccccatcctttggccagagtgctgctgtaggtccaattccctttggaagt
cctggaactccagtccaaggcttcaatgctgttccttttgggtctccagcaactccttcc
ttctctattggagccggatcaaaaccatctggagcaagacagaggctgcaggcacggagg
cagcacaacaggaagaagtag
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