Larimichthys crocea (large yellow croaker): 104930095
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Entry
104930095 CDS
T04659
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X2
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104930095 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104930095 (usp47)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104930095 (usp47)
Peptidases and inhibitors [BR:
lco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104930095 (usp47)
Ubiquitin system [BR:
lco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104930095 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
MORN_2
Motif
Other DBs
NCBI-GeneID:
104930095
NCBI-ProteinID:
XP_010743090
LinkDB
All DBs
Position
VIII:complement(13260187..13278014)
Genome browser
AA seq
1367 aa
AA seq
DB search
MEMVPSEENQFVPKEIQNAAEEPRVLCIIQDTTSAKTVNERLTLNLPVSTTLSKLYEDVA
QKAGYVNSTFDLAWGNTPEMAPLDHSSHMSLSDSGFEPGGKKNFLQLTDKDGQQPQVVSD
ESGTAESSGLDESSQERFIGPLPRDGTPGCSGDYGSPSYSYSSILNKSETGYVGLVNQAM
TCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTD
VTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECG
YESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARK
GLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDVEDEKSPQTESCT
DSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTGSTERALKPKSLLTFELFSVMVHSGS
AAGGHYYACIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYM
LIYRLKDPSRNAKYLSAEDFPEHIKSLVQKEKESEEQEKRQREIERNTCKIKLFCMHPVK
MMMESKLEVHKDKTLREATEMAYKLMELEGVVSLDCCRLVKYDEFHEYLERSYEGEEDTP
MGLLLGGVKSSYMFDLLLETRRPEQAFQPYKPGEVMVKVHVVDLKSETIASPISVRAYLN
QTITEFKQLIAQATGLSAETMRVVLERCYNDLRLLFVPNKTLKAEGFFRSNKVFVESSES
TDHQVAFTDSLLWKLLDRHGNTIRLLVLLPEQSPGTLANRTLCQKVSSDSDAPVEGSKSN
RKSVEAILEESTEKLKNLSLQQQQQGSSTSTSDSQKSSDASDFEHIESSTQEADSNSSLC
VAADNRELENRIRAAAGGSSGASSDPENHFACEERSDSEVNNDRSTSSVDSDILSSSHSS
DTLCNADSGPIQLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDDNGKIKAE
AQYLYFRAEPCSQEDTTWDAQKCLVVHVDKRITLAAFKQNLEPYVGVTSTQFKVFRVYAN
NQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLVDTVFAK
GMTVRQSKEELLPQLKEQCKLDLSIDRVRLRKKTWKNPGTVFLDYHVYEEDISISSNWEV
FLEVLNEPEKMKSMSQLAVLTRRWSPATMKLGPFQEVILESSSVEELKEKLSEMSDIPLE
NLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYRHSTEEPMELS
EDERNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPAKDPGQD
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagcgaggagaaccagttcgtacccaaagagatccaaaatgcagct
gaggagccgagggtgctgtgtataattcaggacaccaccagtgcaaagacggtcaatgag
cggctcaccctcaatctgcctgtctccaccaccctctccaaactctacgaagatgtcgcc
cagaaagcaggatatgtgaacagcacgtttgacctcgcctggggaaacacgccggaaatg
gcaccgctggaccacagcagtcatatgtccctctcagattctggatttgagcctggcggt
aagaagaatttcctccagcttacggacaaagatggacagcagccccaggttgtatcggat
gagtcaggaacagcagaaagcagtggactggatgaaagttcccaggagcgctttattgga
cccctgccgagagacggcaccccaggctgcagtggcgactacggcagtccatcttactcc
tactcgtccatcctcaacaaatctgagacgggttatgtaggcttggtcaaccaagctatg
acctgctatttgaacagtctcctacaaacactgttcatgaccccagagttcagaaatgcg
ctgtacaactgggagtttgaggagtcagaggaggatccagtcaccagcatcccctaccag
ctgcagagactgtttgttctgctgcagactagtaagaaacgggcgattgagaccactgat
gtgacgcggagctttggctgggacagcagcgaggcttggcagcagcatgacgtccaagag
ctgtgtagggtcatgtttgatgccctggagcaaaagtggaagcagactgagcaggccgac
ctgatcaaccagctgtaccaggggaagctgaaggattatgtccgctgtctggagtgtggc
tacgagagctggaggattgatacttatctggacatccctcttgtgatcagacccttcgga
gcaagccaggcctacggcagtgtggaagaagctttacaggcatttatccaaccagaaaca
ctggatggacccaaccagtacttttgtgaacgctgcaaaaagaaatgtgacgcccggaag
ggtctgagatttctgcactttccctacttgctgacactccagctgaagcggtttgatttt
gactacaccactatgcatcgcatcaagctcaacgaccgcatgactttccctgaggagctt
gacatgagtccattcattgatgtggaggatgagaagtcgcctcagacagagagctgcact
gacagcggagcagagaatgaaggcagttgccacagcgaccagatgagcaatgatttctcc
acagatgattgtgtggatgagggcatctgcttggacagcaccggcagcacagaaagggca
ttgaagccaaagagtttgctgacctttgagctgttctccgtcatggtccattctgggagc
gctgcgggtggccactactacgcctgcatcaaatccttcagtgatggccagtggtacagt
ttcaatgatcagcacgttagcaagatcacccaagatgatatcaggaagacttatgggggg
tcctcagggagcagaggctattactccagtgcctttgcaagctctacaaatgcatatatg
ctgatttacagattgaaagatccctcaaggaatgcaaagtatttatctgcggaagacttc
ccagagcacataaagagtttggtccagaaggagaaagagtctgaagagcaagagaagcga
cagagagagattgagcgcaacacttgcaagataaagcttttctgcatgcatcctgtaaag
atgatgatggaaagcaagctggaagtacacaaggacaaaactctccgagaagcaacagag
atggcctataagctgatggagctggagggagtggtctcactggactgctgtcgcttggta
aagtacgatgagttccacgagtacctggagcgctcctacgaaggtgaggaggacacgccg
atgggcctgctgctgggaggagtcaagtcctcatatatgttcgacttgctgctcgagact
cgcaggccggagcaagcgttccagccttacaaacctggagaggtgatggtgaaggttcat
gtcgtggatctgaagagcgagaccatcgcctctccgatcagtgttcgagcatacttgaac
cagacgatcactgaattcaaacagcttattgcacaggctacagggctatctgcagaaacc
atgcgtgtggtcctggagcgctgctataatgacctccggctcctgtttgttccaaataag
acactgaaagccgaggggttcttcaggagtaacaaggtttttgtagagagctctgagtcg
acggatcatcaggttgctttcactgactcactcttgtggaaactgttggatcgtcacggg
aatacgatccgactcttggtcttactgcctgagcagtctcctggtaccttggccaacaga
actctttgccaaaaagtaagcagtgactctgatgcccctgttgaggggtcaaagagcaac
aggaaatctgtagaggcgatccttgaggaaagtacagaaaagttaaagaatctgtctctg
cagcagcagcagcagggctccagtaccagtaccagtgacagccagaaaagctctgacgcc
agcgactttgaacacatcgaatcctcgacccaagaggctgactcaaactcttcactctgt
gtggctgcagacaacagagagttagagaaccggatcagggctgcggccgggggcagcagc
ggcgcctcctccgaccccgagaaccactttgcctgtgaggagcgctcagactctgaggtg
aacaatgaccgcagcaccagctcagtagacagcgacatactgagctccagccacagtagt
gacacactgtgtaatgcagacagcgggcccatacagctggccaatggcttggactcgcac
agcatcacgagtagccgtcgatccaaagcccacgagggcaaaaaagagacgtgggacact
gctgaagaagactccggaacagacagcgagtatgacgacaatgggaagatcaaggcagag
gctcagtacctgtacttcagagcagagccttgttctcaggaggacaccacgtgggatgca
caaaaatgtttagtggttcatgtggacaagagaataacattagcagcattcaaacagaac
ctggagccatatgtgggagtcacctccactcagttcaaggtgtttcgggtgtatgccaac
aaccaggaatttgagagtgtacggctcaatgaaacgctctcatcattctctgatgataac
aagataaccattcgactaggaagagcattgaaaaagggtgaatacagagtgaaagtctat
caactactagtgaatgaaccagagccctgcaagttcctcgtggacactgtgtttgccaag
ggcatgactgttagacagtctaaagaggagctgctccctcagctgaaagagcagtgcaag
cttgacctcagcattgacagggttcgtctcaggaaaaagacgtggaagaacccaggcacg
gtgtttttagactaccatgtctatgaagaagacatcagcatctcctccaactgggaagtt
ttcctggaagttctcaatgaaccagagaagatgaagtccatgtcacagctggccgttctg
acccggagatggagccccgctacaatgaagctggggccgttccaggaagttattctggag
agcagcagcgtagaagaactcaaggaaaagctcagtgaaatgagcgatattcctctcgag
aacctggagtttgcaaagggtcgaggaacatttccttgtgatatatctgtactggagatc
catcaggatttggactggaaccctaaggtgtcgactcttaacgtgtggcctctgtacatc
tgtgacgatggagctgtggtcttctacaggcacagcacagaggaaccgatggagctgtcg
gaggatgagcgcaatgagctgatgaaaaaagagagcagccgtctgctcaagactggacac
cgggtcagctactcaccgcgcaaggagaaagccctcaagatctacctggacggaggccct
gccaaggacccggggcaggactga
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integrated database retrieval system
