KEGG   Larimichthys crocea (large yellow croaker): 104930443
Entry
104930443         CDS       T04659                                 
Symbol
pnkp
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104930443 (pnkp)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lco01009]
    104930443 (pnkp)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lco03400]
    104930443 (pnkp)
Enzymes [BR:lco01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     104930443 (pnkp)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     104930443 (pnkp)
Protein phosphatases and associated proteins [BR:lco01009]
 HAD phosphatases
  Other HAD phosphatases
   104930443 (pnkp)
DNA repair and recombination proteins [BR:lco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     104930443 (pnkp)
SSDB
Motif
Pfam: PNK3P AAA_33 FHA_2 Hydrolase_6
Other DBs
NCBI-GeneID: 104930443
NCBI-ProteinID: XP_019111806
LinkDB
Position
VII:7268380..7276261
AA seq 607 aa
MSCSLVSPSGPRISLENGRAVILGRGPDTGVADKKCSRHQVKVVACYADQDAVVTQLGPN
PSFLDNEKLGRGQSGKLSHGGTLYLVNQNHPFKLHYSLSSNGAASAAARRGLKPADKMKG
GGNGQDKEAQSSPNPKRSIKDFFSTSPMKPSKRRLSPQRGHAEVKRQRRDEEASDRQMKE
EEEEERLAEEKLRQLQRLAEKSTTERKNSTQPSSSSSPPSSSKGCLKSSWQQIGNLMLYT
AAGVKGSDKIAGFDIDGCIITTKSGKVFPTAPDDWKILYPEIQPRLASLLKKGYKVVFFT
NQMGIARGKLRPEVFKSKVEDILATLQLSVQVFVSTGPGIYRKPVLGMWNHLCEKANDGV
AVDQTQSFYVGDAAGRPENWAPGKKKKDFSCSDRLFALNIGLQFHTPEEYFLGWKSAPYS
LPNFDPRKIDNRASLYDPPSASLTSDKTEVIVAVGFPASGKSTFFHTHVIPKGYAYVNRD
TLGSWQSCVSACERALKEGRSVAVDNTNPDQESRKRYVDVAKAMGVPCRCFHFSASLEQA
KHNNRYREMAPSDKKHMKVNDMIFHSYKKHFVAPALSEGFSEILQIHFVPKFKDSESESL
FRQFSEG
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgtcgtgttcgctcgtcagcccgtccggacctcggatttcactggagaacggacgggct
gtgattctgggccgaggtccggacaccggggtcgcagacaagaaatgctccagacaccag
gtgaaggtggtggcttgctacgcagaccaggatgcggttgttactcagctgggtccaaat
cccagtttcctcgacaacgagaaactgggccggggtcagtctggtaaactcagccatgga
ggtaccctctacctggtaaaccagaaccatccatttaaactgcactactctctgagctca
aacggagcagcctccgcagctgcaaggagaggactaaagcctgcagacaagatgaagggt
ggaggaaatgggcaagacaaagaggcacagtcgagtccaaatcccaagcgcagtatcaag
gatttcttttctacctctcccatgaagccgtctaaaagacgactgagcccacagaggggc
cacgccgaggtgaagcgccaaagaagagacgaggaggcctcagatagacagatgaaggaa
gaggaagaggaggagagactagcagaggagaagctcaggcagctgcagcggttggcagag
aagtccacgacagagcggaagaacagcacccagccttcatcatcttcatcaccgccgtcg
tcttcaaagggctgtctaaagagcagctggcagcagattggcaacctgatgctttacact
gctgctggagtcaaagggagtgacaagattgctggctttgacatagatggttgcatcatc
accaccaaatctggcaaagtctttcccaccgcaccagatgactggaagattctgtatcct
gagattcagccaagactggccagcttgctcaaaaaaggatacaaggtggtgttcttcacc
aaccagatggggatcgctagaggcaaactgagaccagaagtctttaagtctaaagtggag
gacatcctcgccactctgcagctctctgtgcaggtgtttgtatcaaccggtcctgggatc
tacagaaaaccagtgctgggaatgtggaatcacttgtgtgagaaggcaaatgatggcgtg
gctgttgaccagacacagagtttttatgtaggagatgctgcgggtaggcctgagaactgg
gctccagggaagaagaagaaggatttctcctgcagtgaccgactgtttgctctgaacatt
ggattgcagttccacaccccagaggagtacttcctgggctggaagagcgccccctacagc
ctgcctaattttgacccaaggaagattgacaacagagcatcactttacgacccgccgtct
gcctctctcacctccgacaagacagaagtcattgttgccgtgggtttccctgcatcgggt
aaatccaccttctttcacacccacgtcattccaaagggctatgcatatgtcaacagggac
acgctcggctcatggcagagctgtgtatcggcatgtgagcgcgctctgaaagagggccgc
agcgtcgccgtggacaacaccaacccagaccaggagtctcgcaaacgctatgtggatgtg
gccaaggccatgggagtgccctgtcgctgtttccacttctcagcgtctctggaacaagct
aaacacaacaacaggtaccgtgagatggcaccatcagacaaaaaacacatgaaggtcaat
gatatgattttccacagctacaagaaacactttgtggctcctgctctctctgagggattc
tccgaaatcctccagatccactttgtaccaaaattcaaagacagcgaatcagaaagcctc
ttccggcagttttcagagggctga

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