Larimichthys crocea (large yellow croaker): 104931007
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Entry
104931007 CDS
T04659
Symbol
spata5
Name
(RefSeq) ATPase family protein 2 homolog
KO
K14575
AAA family ATPase
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104931007 (spata5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lco03009
]
104931007 (spata5)
Ribosome biogenesis [BR:
lco03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104931007 (spata5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
TIP49
AAA_22
AAA_2
AAA_28
RNA_helicase
AAA_14
nSTAND3
Mg_chelatase
AAA_7
AAA_33
Parvo_NS1
Rad17
AAA_18
AAA_3
IstB_IS21
ATPase
DUF815
bpMoxR
DUF5906
SLFN-g3_helicase
CDC48_2
Motif
Other DBs
NCBI-GeneID:
104931007
NCBI-ProteinID:
XP_010744222
LinkDB
All DBs
Position
I:complement(22932646..23046051)
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AA seq
898 aa
AA seq
DB search
MSSKKNKSKSKKASEGDSSLLLKEDSSLQTSSHEGGSCKRLNNSFTVMDFIDKADDKTPK
SCRSTLAQLSLNSMKSASVCIGRPVLLTSTTGRQEVCLGWPVGSFPGGKVGLQKGAQNNL
RVKSGDEVMLHPITGPVLQAEEVLLTNRSKDDTLETDEFKNFFLRSLVGNIILPGNVISL
TYFGRSCSLRVETIKGEDGGILHRPAPVPGLGPDTEESSVVNSVLDSTSVDLSLQLSLLT
VDDNNADGAPSTPGEPGPAASTPRRPANLPSLSSPPSPCTPSYNSQNPPIGSEEDVVSPE
PSLSSEQAEKPPTAPPGGALSTDTFYCLSCSTKVSFRDRAGQEDSDTEAKRSKVTYSMIG
GLSSHLDVIRETIELPLKHPELFSKYGIPPPRGVLLYGPPGTGKTMIGRAIANEVGAHMT
VINGPEIMSKFYGETEARLRQIFTEASQRKPAIIFIDELDALCPKREGAQNEVEKRVVAS
LLTLMDGIGSEGHSGQLLVLGATNRPHALDPALRRPGRFDKELEVGVPGAAERADILQKQ
LSFVPCSATAEELRQLADAAHGYVGADLAAVCKEAGLHALKRALGGSHQPSDQQLIGTVT
VTRQDLQWAMSVVKPSAMREVAIDVPKVHWSDIGGMEEVKLKLKQAVEWPLRHPEAFTRM
GIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELLSKYVGESERAVREVFRKA
RAVAPSIVFFDEIDALASERGSSSGSSGVGDRVLAQLLTEMDGIEQLRDVTVLAATNRPD
MIDKALMRPGRLDRIVFVPLPDPPTRREIFSLQFRNMPVAQNVSLDDLVTQTDKYSGAEI
TAVCREAALLALQEDIKAQQVEARHFESALNTVKPRIPDSLIQSYISYQQQHSGLCFF
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaagaaaaataaaagtaaatcgaagaaggcgagtgaaggggatagttcactc
ttactgaaggaggactccagtctgcagacatccagccacgaaggaggaagctgcaaacga
ttaaacaattcattcactgtcatggatttcattgacaaagctgacgacaaaacacccaaa
agttgcagatcaactttagcccaactgagcctcaattcaatgaagtcagccagcgtttgc
atcgggagaccggtcctgctgacgagtaccacaggacggcaagaggtgtgtttaggatgg
ccggttggctcctttcctggtggaaaagttggtcttcagaaaggtgctcagaataacctc
agagtgaagtcaggggacgaggtgatgctgcatccaataacaggtcccgtgcttcaggct
gaggaggtgctgctcactaacaggtcaaaagatgacacactggagacagatgagttcaag
aacttctttctgaggtctctggttgggaacatcattttgccaggaaacgtcatctccctg
acttactttggccggtcctgcagtctccgggtcgagaccataaaaggggaggatggtgga
atcctccacagaccagctcccgttccaggactgggccctgacacggaggagtcctctgtg
gtgaactctgtgctggactccacgtcagttgacctctccctgcagctcagcttgctcact
gtggatgacaacaatgccgatggggcaccaagcactcctggagagccaggacctgcagcc
agcaccccacgacgaccagccaacctgccttccctctcctcaccacctagcccctgcacc
ccttcctacaactcccagaatcctcctattgggtcagaggaagatgttgtcagtccagag
ccctcacttagctcagagcaggcagagaaaccccccacagctccccctggtggtgctctg
agtactgacaccttctactgcctctcctgctccactaaagtcagtttcagagacagagca
ggacaagaggattcagacacagaggctaaacggtcaaaggtcacatacagcatgattggt
gggctcagcagccatttggatgtcatcagagagacaattgaactccctctgaaacaccct
gagttgttttccaagtacgggatcccacctccccgaggagtccttctgtacggtcccccg
ggcacaggaaagactatgattggacgagccatagccaatgaggttggagctcacatgacc
gtgatcaacggcccagagattatgagcaaattttatggtgaaacagaagcaaggctgagg
cagatcttcactgaagcgtctcagagaaaacctgcaatcatctttattgatgagctggat
gctttgtgcccaaagcgagaaggagcgcagaatgaggtggagaaacgagttgttgcttct
ctcctgactctgatggatgggattggatcagagggtcactcgggtcagctcttggtcctg
ggggccacaaaccggccccatgccctcgaccctgccttgcgccgaccaggacgctttgac
aaggagctggaggtgggagttcctggtgctgccgagcgtgcagatattttgcagaagcag
ctgagttttgtaccatgtagtgccaccgcggaggagctgaggcagctggccgatgctgct
cacggttacgtaggagctgaccttgcagctgtttgcaaagaagcaggtttgcatgcactg
aagcgggcacttggaggttcccaccagccatcagaccagcagctgattgggacggtgacc
gtcactcggcaagacctccagtgggccatgtctgttgtgaaaccaagcgccatgagggag
gtcgctatcgatgtccccaaggtccactggtcagacatcggcgggatggaggaggtgaag
ctgaaactgaagcaggctgtggagtggcctctgaggcaccctgaggccttcacccgcatg
gggatccagccacctaaaggagtcctactttatggacccccaggctgctccaagaccatg
atagccaaggcactggctaatgaaagtggactgaacttcctggctattaaaggtcctgaa
ttactgagcaagtatgtcggcgagtccgaaagagccgtcagagaggtgtttcggaaggca
agggccgtcgctccctccatcgtcttctttgatgagattgacgcgcttgccagtgaaaga
ggaagctcctcgggctccagcggtgtaggcgaccgcgtcctggctcagctcctgacagag
atggacggcatcgagcaactccgagacgtcactgtgctggccgccaccaaccggcccgac
atgatcgataaggctctgatgcgtccaggtcgcctcgaccgaatcgtgtttgtgcctctt
ccagatcctccaacccgccgagagatattttctctccagttccgaaatatgcctgttgcc
caaaatgtgtcccttgacgacttagtgactcagaccgacaagtattctggagcagagata
acagcagtatgcagagaggctgccctcctggccctacaagaggacatcaaagcccagcag
gtcgaggccagacactttgaaagtgccttgaacactgtgaagccccggatcccggactct
ctcatccagtcgtatatcagctatcagcagcagcacagcggcctgtgcttcttctga
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