Larimichthys crocea (large yellow croaker): 104931066
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Entry
104931066 CDS
T04659
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03022
Basal transcription factors
lco03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104931066 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
104931066 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104931066 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
lco03400
]
104931066 (gtf2h4)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104931066 (gtf2h4)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104931066 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
104931066
NCBI-ProteinID:
XP_019109064
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All DBs
Position
XIII:complement(7680949..7692791)
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AA seq
470 aa
AA seq
DB search
MKLRVQLQCKNLHEYLRELSPEILDRLYNHPATCLAVYRELPSLAKNYVMRMLFLDQPLP
LAAVALWVKKDSQKDHDECVSVLAGLRLWHSQQLQGGLQGYVLNPVFKDNLRIALLGGGK
AWADEGSSLGPDRHARDIESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLVQAGLMKS
EAGEAPYITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTSSSSSSSSSTSSS
SNLASSAGAGDAGYIVVETNYRIYAYTNSELQIALVALFSEMLYRFPNVVVAQVTRESVQ
QAIANGITAQQIIHFLRTRAHPVMLKQTPALPPTITDQIRLWELERDRLQFTEGVLYNQF
LSQADFEVLRDRAQGLGCLVWQDVAHRVMVVTPQGHSEVKRFWKRQKSHT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcgtgtccagctgcagtgcaagaacctgcatgaatacctcagagagctgagc
cctgagatcctggacagactgtacaaccatcctgcaacatgcctggctgtctacagggag
ctcccctctctggccaagaactatgtgatgcgaatgctgttcctggatcagcctctcccc
ctggcagcggtggcactgtgggtgaagaaagacagtcagaaggatcatgatgaatgtgtc
tcagtgttggcaggactccgcctctggcacagtcagcagctgcagggaggtctgcaggga
tacgttttaaacccagtgttcaaagacaacctgaggatagctctgctcggcgggggcaaa
gcatgggcggatgagggcagcagtctgggtccggaccgccacgcacgggacattgaaagt
ctcgaccgctatgctatggagcgctgggaggtgatcctgcatttcatggtgggttctccc
agtgctgcagtcagtcaggacctggctcagctgctggttcaagcaggactcatgaaaagc
gaggcaggagaggcgccgtacatcacctcagctggatttcagttcctcttactggacacg
gcttctcagctgtggtacttcacgctgcagtacctcaaaacagctcagtccagagggatg
gacctggtggagattttgtcattcttattccagctcagcttctcgactctgggcagagat
tactcggtggagggcatgagcgagtcgttgctcaccttcttgcagcacctgagggagttt
ggactggtcttccagaggaagaggaagtcgaggcggtactaccccaccagactggctatc
actctggctgcaggagtcacttcctcctcctcctcctcctcttcttccacctcttcctcc
tctaacttggcttcctctgctggtgctggagacgcaggctacattgtggtagaaaccaat
tatcgtatctacgcctacacaaactcagaactccagatcgccctggtggctctcttcagt
gaaatgctgtatcgcttcccaaatgtagtggtggctcaagtgacgagggagtcggtgcag
caggccatcgccaacggcatcaccgcccaacagattatccacttcctgaggacccgagct
caccctgtcatgctcaaacagactccagctctgcctccgactataacagatcagatccga
ctgtgggagctcgagagagatcgactgcagttcacagagggagtgctctacaaccagttc
ctctcccaggctgactttgaggtgctgcgagacagagctcagggcctgggctgtctggtg
tggcaagacgtggctcacagggtgatggtggtgacaccgcagggacacagcgaggtcaag
aggttctggaaacgacagaagtctcacacgtaa
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