Larimichthys crocea (large yellow croaker): 104932820
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Entry
104932820 CDS
T04659
Symbol
frem1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104932820 (frem1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
104932820
NCBI-ProteinID:
XP_027143922
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Position
XIV:complement(13751368..13780445)
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AA seq
2189 aa
AA seq
DB search
MGSWGQTLAWISLPVLLLGMTCSSHSSLVKVNKGLKVKRGQAAYLQEGDLQFHIPHQKDT
CKVEVVLNEPITQRVGKVIPQVFDCHYLADEVKYVHNGCPLLKEDTVKLRLYRFTETETY
MEVFSLHVDIMEPECSIIKLGPKSLEVPEFYSLSDPVDGNVVSFRYERRSSLECSVHLSS
HDTHLPAHGQLVTGEPDKATKRGDEPESFIHLRQQLDNKERAMCKSEDCLKGLKLVKFTK
IPCDDFLMMGLRYQHIDPPSPDVDYIAIKVDLKDTRSGSIYQSEQAWIPVRIVGAMPNQP
PKPLFMSMFILEVDQFILTPLSTATIDAEDEETLKQLLVFNITKPPVDGFITHLSDHTRP
ISSFTWLDLNDMLIGYQPPNSSHTQRRNYEVEFEVYDFFFEKSPSMTVHMSVRNADTNAP
RVSWNMGLSLLEGQSRPIKWEQFQIVDNDNLNAVRIITVDGLQHGRLTVRGGKGFMFTVN
DIKAGVVRYHHDDSDSTKDFIIFRITDSHHQTRHKFPIKILPKDDTPPFLITNMLLEVSE
GQTALLRGSTLQASDMDSSDDFILFNITRPPQAGEIMKIPGPGLTGYPVSHFLQKDLSQS
MVYYRHLGNEVFDDSFEVVLSDFNDPPNLSESQVVMVHIEPVPDQPPKEVPGSSRCLVIK
ETEVVHITRQHLHFVDQESPDSELTYTVTTPPFYTGFHSSPDAGRLFLVDSIPKFTKDSN
APVLRLFTQHAVNFMKVAYMPPIMDIGPYPQYIQLVLSVTNHLGKTVTGICFNITVMPVD
NQQPQVLTNRLTVDEGGESWLGPEHLLLSDVDSMEEALQVELQREPQHGALQLGGLQLKP
GRSFTVQDLKSLKVRYKHDGSETVEDNIEFTATDGINPVSFVLQVKVIPVNDEVPVLVPG
LKSVLSCTEGQEVVITAEYIYATDADSDNNSLAFLIARQPYHGVVLRDGVIVDRFIQADI
TAEIITYKHTGLEIGLTPRHDTITFVISDGETENTALCCSERNPTRTRGTAQLRDSLPVY
DLQITVFPVDSQPPSLMTGDIFMVDEGGTAPITASHLKASDMDTVLEELVVSLISPPQFG
YIENILPSPGFEKSNMGISIASFSYKDIIDGHVNYVQSRHQRMEPTADQFMLCVSDGKHS
SAHVPFYIIINPTNDEIPEFVARNITVQEGEMKQLDSSVLHAMDLDVPRDALIFSVVKAP
QHGSIINHSSEKQAYKRREASPRSAVVDFTMTDLINGMDLRYMHDDSENMADSFTVQLTD
GKHQLHRQVMVKVQPVNDEEPHVIRNNGLEVEPGEARIISSVTLFAQDGDTPSSEVMYIF
ESVPSQGLLQIKEGQVWVTVTAGRNCSQEKVDMNLLRYVHTGLHGSKTQDFFVFYLLDGK
NQSPPQHFHISVKDLEKGNIAIFVKPVNVSRGDRVVLTTDVLLATDGTDKPEELLYTITN
PPPHGHIEYIKHPGLAISTFSQLDIAANLVAYVHDNRASTPTETFQFVVSNGKSSRNGSF
EITVEMVDRVLPSLSFNKGLSVPQGSSMILGPDCLAMSDPDTPPNALIFVLLQPPQYGRL
LLGSATLTAGSNFTQKNVQELEVIYRHDGGPSQIDRFAFTAFDSTNRGFLLDGRLQTTPV
FFTIQIKPLDKSSPEIVKLLPLWKAELLDDGRYGIFLSSRELKAHDSDSRDEELIFCIVR
QPYFGYLENITTGGFVPQRFSQMELNKRTIVYIINPDRESLSDSLEFSVSDPLGNTGPSH
ILEFSWSTMELSQPEHSVCEDQGTFSLDIIRSGNLAESSYITVKVKEVTATAGKDFLFSA
SSLIQFDPGVSKRSWQTEIVQDHLEEAEEMFEVLLVAPEGTVIGSISKAQVTIRESGRKT
GRRGQCRLNPEREAPVLGGKEVRSDTYPQHGSIQLEKLPLGTDAVIWSRGDSISRPAVNV
PKKKLKVTGNPKSIAPSSVFHNGTDIVYTYHGIMQMQVEDDTSPSRKGRKANIRVVSRGA
QRQASAAFTKTKTDVQPRISKPKTTGLGKGHATADSSTPKPCVPELMGLLHFNHSTNQLY
HCNGVSWKPWAPTDQMVSAQMCPQGWTFHGGHCYTLSTEHKVTWSTANKACRERYKGTLT
SVLSKVDMDWLWDFSGRKPFWIGLNDREGRGRWEWVGGEPVSYTNWRKTPPRSKMKGGKK
CILVWKRAKWQIRDCKTSRGHRFVCSVKT
NT seq
6570 nt
NT seq
+upstream
nt +downstream
nt
atgggttcatggggtcaaacgctggcctggatctcacttccagtgcttctgctgggaatg
acctgctcatcacacagttctcttgtgaaagtcaataagggtttaaaggtgaaacggggg
caggcagcctacctccaggaaggtgacctgcagttccatattccccatcagaaggatacg
tgcaaggtggaggtggtgttaaatgagcccataactcaacgagtgggaaaagtcatccct
caggtatttgattgccactatctggctgatgaggttaagtatgtccataacggctgtcca
ttgttaaaggaggacactgtcaagcttcgactgtacaggttcacagagacagagacatac
atggaggtgttttctctccatgtggacattatggaacctgaatgcagcatcataaagctg
ggacctaaatccctggaggttcctgaattctacagcctgtctgatcctgtggatggcaat
gtggtgtcctttcgctatgagaggaggtctagcctggaatgtagtgtccatttgagtagt
catgatacccacttgccagctcatggccaactagtcaccggagagccagataaagctaca
aagagaggggatgagccagagagcttcatccacctacgtcagcagctggataataaagaa
agagcgatgtgtaaatctgaagactgcctgaagggtctgaagctagtgaagttcaccaag
attccctgtgatgacttcctgatgatgggcctgaggtatcagcatatagaccctccatct
ccagacgtggactacattgcaatcaaagtggacctcaaggacaccaggagtggcagcata
tatcagtctgagcaggcttggattccagtgcggatagttggtgcaatgcccaatcagcct
cccaaaccgttgttcatgtccatgtttatcctggaggtcgaccagttcatcctcactccg
ctctccacggctacaatagatgctgaagatgaggaaactctcaagcagcttctggttttc
aacatcaccaaaccccccgtggacggcttcatcacccatctgtctgatcacactcgtcca
atctcctcgtttacatggctcgacctcaatgacatgctcattgggtatcaacctccaaac
tcttcacatacccaacgtcggaattatgaggtggaatttgaagtttatgatttcttcttt
gagaagagtccatcgatgactgttcatatgtctgtaaggaatgcagacaccaatgctcca
agagtgtcttggaatatgggtctcagtctgttagagggtcagtcccgtccaataaagtgg
gagcagttccagattgtggacaacgacaacctgaatgctgttcgaattatcactgtggac
ggcttgcagcatggacggctcactgtcagaggtggaaagggcttcatgttcaccgtcaat
gatattaaagctggcgtggttcgctatcaccatgacgacagcgactccaccaaagacttc
atcatcttccgcattactgacagtcaccatcagacccgacacaagtttcccattaagatc
ctccctaaggacgacacccctccgttcctcatcaccaacatgctgctggaggtgtctgag
ggccagacagctttactgagaggctccaccctccaggcctcagacatggactccagcgac
gactttattctctttaacatcacccgtcccccacaggcaggagagatcatgaaaatccca
ggaccaggtctcacaggttatcctgtcagccactttctgcagaaagacctgtctcagtcc
atggtttactatcgacacctagggaatgaggtgtttgatgactcctttgaggtggttctg
tcggatttcaatgacccacccaacctgtcagagtctcaagtggtgatggtgcacatagaa
cctgttccagaccaaccacctaaagaggttcctggttccagtcggtgtcttgtgatcaaa
gaaacagaagtggtccatataacacggcaacaccttcactttgtagaccaggagtcccca
gacagtgagcttacatatactgttactactccacctttctacactggttttcacagcagt
ccagatgcagggaggcttttcttagtcgacagcatacccaaattcaccaaagactccaac
gcaccagtgctgcggctcttcacacagcatgcagtgaactttatgaaagtagcctacatg
cctccaatcatggacatcggcccgtatccccagtatatccagcttgtcctctctgtgacc
aaccacctgggcaaaacagtcaccgggatctgctttaacatcactgtgatgccagtggac
aaccagcaaccacaggttcttaccaaccgtctgactgtagatgagggaggggagtcctgg
ctcggccctgaacacttactgctgtcagacgtagactccatggaggaagccctgcaggtg
gagcttcagagggaaccacagcatggagctctgcagctaggcggcctccagctaaaaccg
ggccgttctttcactgtgcaagacctgaaaagccttaaagttaggtacaaacacgatggc
tcagaaactgttgaggacaacattgaattcaccgcaactgatggtatcaacccagtcagt
tttgtcctgcaagtgaaggtgatacctgtcaatgacgaggtcccggtgttggtccctggt
ttgaaatcagtcctcagctgtacggagggacaggaagtagtcatcacagcagagtatatc
tacgcaaccgatgcagacagcgacaacaacagcctggccttcctgatcgcccggcagccg
tatcacggtgtggtgctccgggacggtgtcatcgtcgatcgcttcatccaggcagacatc
actgcagagataatcacctacaaacacacaggactggagattggactcactcctcgccat
gacaccatcacctttgttatttctgatggagaaacagaaaacactgctctgtgctgcagt
gaaagaaatcccaccaggaccagaggcacggctcagctccgggacagcctgcctgtgtat
gacctccagatcacagtgttcccagtcgacagccaaccaccttcactcatgacaggagat
atctttatggtggatgagggtggaactgccccgataactgcatctcatttgaaggcctct
gacatggacactgtcctggaagagctggtggtcagtctgatttcgccacctcagtttggc
tacattgaaaacatcctgcccagtccgggttttgagaaaagcaacatgggcataagcata
gcctccttttcatacaaagacatcattgatggtcatgtgaactacgtacagtccagacac
cagaggatggagcccacagctgaccagttcatgctctgtgtctcagatggcaaacacagc
tctgcccacgtccccttctacattattattaacccaactaatgatgagatcccagagttt
gtggctcgcaacatcacagtacaagaaggagaaatgaagcagctggactcatcagttcta
catgcaatggatctggatgtcccaagggacgccctgatcttcagtgtggtcaaagcccca
cagcatggcagcatcatcaaccacagcagtgaaaagcaggcctacaagagacgggaggcc
agtcctcgatctgcagtggtcgactttacaatgacagatcttataaatggtatggatttg
aggtacatgcacgatgactctgagaatatggcggacagttttaccgtccagctgactgat
gggaaacaccaactccacagacaagtgatggttaaagtgcagccagtcaatgacgaggag
cctcacgtcatcaggaacaatgggctggaggtggagccaggagaagccaggattatatcc
agtgttacactctttgcacaggacggtgatactccttcctcagaggtcatgtacatattt
gagagtgttccaagccaaggactactacagattaaggaaggtcaggtctgggtgacagtg
acagcggggagaaactgtagccaggagaaggtggacatgaacctcctgcgctatgtgcac
accggcctgcacggatctaaaacacaggacttctttgtcttctatttgttggatggaaag
aatcaatcaccaccacagcacttccacatctctgtcaaagatctagaaaaaggtaatatc
gccatctttgtgaagccagtgaacgtcagccgtggggatcgtgtggtcctcaccacagat
gtgctgttagccacagacggcacagacaaacctgaggagcttctgtataccatcaccaac
cctcctcctcacggacacatcgagtacatcaaacatcctgggctggccatctccaccttc
agccagctggacatagcagccaaccttgtggcttatgttcatgacaaccgagccagcaca
cccacagaaacctttcagtttgttgtaagtaatggtaagagtagccgaaatggaagcttt
gagatcacagtggaaatggtggatcgcgtcctgccgtctctgtccttcaacaaaggcctc
tcagttcctcagggctcctccatgattctgggtcctgactgcttggcaatgtctgaccct
gacactccacccaacgccctgatctttgtcctgctccaaccgccacagtatggcaggctg
cttttaggcagtgccacactaactgctggctcaaacttcacccaaaagaacgtgcaggag
ttggaggtaatatacagacatgatgggggaccatcgcagatcgaccgatttgcttttact
gcctttgacagcactaaccggggcttcctgctggatggacggttacaaactacacctgtg
ttcttcacaattcagatcaaacctttggataaatcgtctcctgagatcgtgaaactgctt
cctctttggaaagcagaacttttagacgacggccgatatggaatctttctgtcatctcgt
gaactgaaggcccatgacagtgatagcagagatgaagagctgatattctgcatcgttcgt
cagccttattttggttacctagaaaacatcaccacaggtggttttgtaccacagcgcttc
tctcagatggagctgaacaagagaacgattgtctacatcatcaacccagacagggagtct
ctctcagacagcctggagttcagtgtgtctgatcctttggggaacactggaccttctcac
atactagaattcagctggtccaccatggagctgtctcagcctgagcactccgtgtgtgag
gatcagggaacgttctcgctggacatcatccggagcggaaacttggcagagtcttcatat
atcactgtgaaggtaaaagaggtgactgcaacagctggaaaagatttcctctttagcgcc
tcttccctcattcagtttgatccaggagtgtcaaagaggagctggcaaactgagatcgtc
caggatcacctcgaggaggctgaggagatgtttgaagtgctgctggttgcccctgaaggc
acagtgatcggcagcatcagcaaggctcaagtcaccatcagagagtcggggaggaagaca
ggaagaagaggacagtgccggctgaaccccgaacgagaggctcctgttctgggaggaaaa
gaggttcggtcagacacatatccccaacatggatccattcaactagagaaactgcccctg
ggcacagatgcagtaatctggagccgtggagacagcatctccaggcctgcagtaaatgtt
ccaaaaaagaagctcaaagttacgggcaacccaaagtctattgcaccttcatcagttttt
cacaacgggacagacatcgtttacacatatcatgggatcatgcaaatgcaagtagaggac
gacacctccccatcgaggaagggcagaaaggcaaacatccgtgtggttagcaggggagcc
cagcggcaggcgtcagcagcgtttactaagacgaagacagatgttcaaccaaggatctca
aaacctaaaacaactggactgggcaaaggacatgctacagctgacagctccacaccaaag
ccctgtgtgccagaactaatgggactcctgcatttcaaccacagcaccaatcagctttat
cactgcaacggagtctcctggaaaccctgggcacctactgatcagatggtgagcgctcag
atgtgtcctcagggctggacctttcatggtggccactgctacaccctcagcaccgagcac
aaggtcacatggagcacagctaacaaggcctgcagggagagatataaaggcactctgaca
agtgttctttctaaagtcgacatggattggctgtgggacttcagcggaagaaaaccattt
tggataggtctgaatgacagggagggccgaggacgatgggagtgggtaggcggcgagccg
gtcagctacactaactggaggaagacgcccccccggtccaaaatgaagggaggcaaaaag
tgcatcctggtgtggaaaagggcaaagtggcaaatcagagactgcaagacgagcagaggt
catcgctttgtgtgttcagtgaaaacatga
DBGET
integrated database retrieval system
