Larimichthys crocea (large yellow croaker): 104933122
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Entry
104933122 CDS
T04659
Symbol
ubqln1
Name
(RefSeq) ubiquilin-1
KO
K04523
ubiquilin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104933122 (ubqln1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104933122 (ubqln1)
03051 Proteasome [BR:
lco03051
]
104933122 (ubqln1)
Membrane trafficking [BR:
lco04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
104933122 (ubqln1)
Proteasome [BR:
lco03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
104933122 (ubqln1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
UBA
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
104933122
NCBI-ProteinID:
XP_019115460
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All DBs
Position
III:30612674..30619838
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AA seq
583 aa
AA seq
DB search
MRSRVRAGVTSTTTFCRVIGTDTHLRPDNCAFLSRSAHPSLAPDRTEMSGAVKDEPRAPS
DRQRCERIHVAVKSLTESKDYTVRAGCTVRQLKGGLAERMGVPAEQLVLIHSGRVLRESE
LLSHLKGQDDSVSICMIQRPQHSSPAPTNDPAPETVQSDLTVLLNPDNFTPSPTSPLCLV
EGLDNLGLTNSGPGFFPALQRQMESQLLADPEMMCRLLNSPFVQNTLSNSSPQLARQLIQ
SNPQIQQLLQTNPEVEDMLNNTGVITQVLELIRNPDMIEEMMHHGDRALDNLQPEQGNPE
TTGDSDSGFQNTDTKRLKLSQTQTVVPPVVTTSSEHQQPAEKESKQTPPFSSHSTDPLRG
LTATPRADPNPQSTVTAGMQSLLEEITASPGLMESLLSGPYVSSLLNCLSQNPDLAAQML
LSHPLFSGNPQLQQQMREQIPLFLQQMQGPELLSAMLNPRAMEALLQIQQALQTLAAEAP
ALIPTAGLGNIGANANTAPELGSNNQSGSGPGVATVTERQQQQFVQQMLQALANSNYGVH
GEEFQEELEQLSSMGFGDRHANLQALISTGGDLNTAVQHLLNL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcgggtcagagctggcgtaacatccacaacaactttctgccgagtcatcggg
acagacacgcacctccggcccgacaactgcgcgtttctctccaggtccgctcatccatcg
ttggcaccggacaggactgagatgtcaggcgcggtgaaagatgaaccgagagcaccgagt
gatcgtcagaggtgtgaaaggatccacgttgcagtcaaaagtctcacggagagcaaagac
tacaccgtcagagcaggctgcaccgtcagacagctgaaaggaggtctagcagagcgcatg
ggagtcccagcagagcagctggtactgatccactccggccgggtgctcagagagtcagaa
ctcctgagtcaccttaaaggacaagatgactcagtcagcatctgcatgatccaaaggcct
cagcattcatctcctgcacccaccaatgatccagctccagaaacagtccagtcagacctc
acagtccttctcaaccctgataacttcacaccatctcctacctctcccctgtgcctggtg
gaaggtctggacaatctaggcctaacaaacagcggtcccggcttcttccctgctctccag
cgccagatggagagccagttgctagctgacccagagatgatgtgtcgtctcctgaacagc
ccttttgttcagaacaccctttccaactccagccctcaactagccagacagctcattcag
tctaatccccaaattcagcagctcttgcagacaaacccagaggtggaagatatgcttaac
aacacaggtgtcatcacgcaggtgctggagctaatcagaaaccctgacatgatagaggaa
atgatgcatcatggtgacagagcattagacaatttgcagccagagcagggcaaccctgaa
accactggtgattctgattctggctttcagaacactgacacaaaaaggctcaaattatcg
cagacccaaacagtggtacccccagtggtgactacatcatctgagcatcaacagccagct
gaaaaagaaagcaagcagactccacccttctctagtcactctacagatcctctcagagga
ctgactgccacgcccagagctgatccaaaccctcagagcacggttactgcaggcatgcag
tcgctgctagaggagatcacagccagtccaggactgatggagagcctgctgtctgggccg
tatgtcagcagcctgttgaattgcctcagccagaaccctgacctggctgctcagatgctg
ctgagccaccctttgttctcaggaaatcctcagctgcagcagcagatgagagagcagatc
cctctcttcctgcaacagatgcagggtccagagctgctgtcagccatgttaaaccccaga
gccatggaggctctgctacagatccagcaggccttacagactctggctgcagaggctcct
gcactgatacccacagctggtcttggaaacatcggagccaatgctaatactgcccctgag
ctgggatctaacaaccaatcaggaagtggtcctggggttgccacggtgactgagcggcag
cagcagcagtttgtacaacagatgctacaggcgctggctaacagcaattatggggtccat
ggtgaggagttccaggaagaactggagcagctgagctcaatgggcttcggagacagacac
gctaatcttcaggccctgatcagcacaggaggggacctcaacactgctgtacaacatctg
ctcaacctctga
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