Larimichthys crocea (large yellow croaker): 104936481
Help
Entry
104936481 CDS
T04659
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104936481
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104936481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
PRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_10
zf-RING_6
CCDC47
Gp58
PRP1_N
Motif
Other DBs
NCBI-GeneID:
104936481
NCBI-ProteinID:
XP_027139241
LinkDB
All DBs
Position
I:8287734..8289479
Genome browser
AA seq
545 aa
AA seq
DB search
MAQQGNKLDRETISCPICLDLLKDPVTTSCGHNYCMNCIKSHWDGEDEKRIHSCPQCRQT
FTPRPVLKKNTMLAALVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLKALKSCLACL
ASYCEKHLQPHHDAAPLKKHKLVEPSKKLQENICSRHDEVMKIFCRTDQQCICYLCSMDE
HKGHDTVSAAAERTERQRELEVSRLNIQQRIQDREKDVKELQQEVEAINGSADKAVEDSE
KIFTELIRLMEKRRSDVKQQVRSQQETEVSRVKDLQEKLEQEITELKRKDAELEKLSHTE
DHNQFLHNYPSLSRLSQSTDSSSINIRPLRDFEDVTAAVSELRDKLQDVLRDQRTNISLT
DTEVHVSLSGPEPEPKTRAEFLKYSRELTLDPNTANTHLLLSEGNRKVSIPPFVVYPQVL
SRERLTGRCYWEVERSGGVYVAVAYKNISRAGRSDECGFGLNDKSWMLHCDTDSYYFRYN
KVRTPVSGPQSSRVGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPLYAGLGIHLGSAE
LCEVK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaaggaaataaactggaccgggaaaccatctcttgtccgatctgtctggat
ctactgaaggatccggtgactacttcctgtggacacaactactgcatgaactgtatcaaa
agccactgggatggagaggatgagaagagaatccacagctgccctcagtgtaggcagacc
ttcacaccgaggcctgtcctgaagaaaaacaccatgttagcagctttagtggaggaactg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagctctgaagtcctgtctggcctgtctg
gcctcttactgtgagaaacacctccagcctcatcatgatgcagctccattaaagaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcatgatgaggtg
atgaagatattttgtcgcactgatcagcagtgtatctgttatctctgctctatggatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctc
gaggtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaaggag
ctccaacaggaggtggaggctatcaatggctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctcatggagaaaagaaggtctgatgtgaagcagcag
gtcagatcccagcaggaaactgaagtgagtcgagtcaaagatcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctggagaagctctcacacacagag
gaccacaaccagtttctacacaactacccctcactgtcacgactcagccaatctacagac
tcatccagcatcaatatccgtcctctgagggactttgaggatgtgacagctgctgtgtca
gagctcagagataaactacaggacgttctgagggaccaacggacaaacatctcactgaca
gacactgaagtccatgtttcactgtcaggaccagaaccagagcccaagaccagagctgag
ttcttaaaatattcacgtgaactcacactggatccaaacacagcaaacacacatctgtta
ttatctgaggggaacagaaaagtgagtattcccccattcgttgtatatcctcaggtcctg
agtagagagagactgactggacgttgttactgggaggtggagaggagtggaggagtttat
gtagcagtcgcatacaagaatatcagcagagcagggagatcagatgaatgtggatttgga
ttaaatgacaaatcttggatgttacattgtgatacagacagttattactttcgttacaac
aaagtccgcactcccgtctcaggtcctcagtcctccagagttggagtgtacctggatcac
agtgcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccacagagtc
cagaccacgttcactcagcctctctatgctggacttgggattcatcttggatcggctgag
ttgtgtgaagtcaaatag
DBGET
integrated database retrieval system
