Larimichthys crocea (large yellow croaker): 104937296
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Entry
104937296 CDS
T04659
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104937296
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104937296
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
SPRY
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
Gp58
CCDC47
PRP1_N
Fib_alpha
RSS_P20
DUF2383
Motif
Other DBs
NCBI-GeneID:
104937296
NCBI-ProteinID:
XP_019116499
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Position
I:11227775..11229448
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AA seq
557 aa
AA seq
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MAQQGNKLDRETFSCPICLDLLKDPVTIPCGHSYCMNCIQNFWDGEDEKRIHSCPQCRQT
FTPRPVLKKNTMLAALVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLKALKSCLVCL
ASYCEKHLQPHHDVAPLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELEVSRLNIQQRIQDREKDVKELQQEVEAINGSADKAVEDSE
KIFTELIRLMEKRRSDVKQQVRSQQETEVSRVKDLQEKLEQEITELKRKDADLKKLSHTE
DHNQFLHNYPSLSRLSQSTDSSSINIRPLRDFEDVTAAVSELRDKLQDVLRDQRTNISLT
DTEVHVSLSGPEPEPKTRAEFLKYSRELTLDPNTANTWLLLSEGNRKVTGMEKTQSYSSH
PDRFTDYYQVLSRERLTGRCYWEVERRGGVDVAVTYKNISRAGRSYECLFGHNDKSWRLN
CYTNSYNFYYNKVQTPVSGPRSSRVGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPLY
AGLYVYSGSSAELCEVK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaaggaaataaactggaccgggaaaccttctcttgtccgatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgaactgtattcaa
aacttctgggatggagaggatgagaagagaatccacagctgccctcagtgtaggcagacc
ttcacaccgaggcctgtcctgaagaaaaacaccatgttagcagctttagtggaggaactg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagctctgaagtcctgtctggtctgtctg
gcctcttactgtgagaaacacctccagcctcatcatgatgtagctccattaaagaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcatgatgaggtg
atgaagatgttctgccgtactgatcagcagtgtatctgttatctctgctctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctc
gaggtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaaggag
ctccaacaggaggtggaggctatcaatggctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctcatggagaaaagaaggtctgatgtgaagcagcag
gtcagatcccagcaggaaactgaagtgagtcgagtcaaagatcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgatctgaagaagctctcacacacagag
gaccacaaccagtttctacacaactacccctcactgtcacgactcagccaatctacagac
tcatccagcatcaatatccgtcctctgagggactttgaggatgtgacagctgctgtgtca
gagctcagagataaactacaggacgttctgagggaccaacggacaaacatctcactgaca
gacactgaagtccatgtttcactgtcaggaccagaaccagagcccaagaccagagctgag
ttcttaaaatattcacgtgaactcacactggatccaaacacagcaaacacatggctgtta
ttatctgaggggaacagaaaagtgacaggaatggaaaaaactcagtcttattctagtcac
ccagacagattcactgattattatcaggtcctgagtagagagagactgactggacgttgt
tactgggaggtggagaggagaggaggagttgatgtagcagtcacatacaagaatatcagc
agagcagggagatcatatgaatgtttatttggacacaatgacaaatcttggaggttaaat
tgttacacaaacagttataacttttattacaacaaagtccaaactcccgtctcaggtcct
cggtcctccagagttggagtgtacctggatcacagtgcaggtattctgtccttctacagc
gtctctgaaaccatgactctcctccacagagtccagaccacgttcactcagcctctctat
gctggactttatgtttattctggatcctctgctgagttgtgtgaagtcaaatag
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