Larimichthys crocea (large yellow croaker): 104937545
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Entry
104937545 CDS
T04659
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104937545
Spliceosome [BR:
lco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104937545
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
104937545
NCBI-ProteinID:
XP_019111951
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All DBs
Position
X:9343324..9379956
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AA seq
457 aa
AA seq
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MLMSTDVASIMLPVSRGLMDRDRELDTMAGVHPNAGGAPAVVRGMKRGDPEPDGQTAAAL
VDSAGAECKRPRIDGSGGIGEVGQNNDPLTLGYHGYPSHSQGSQDSAGGQEGLVPPPFSA
FPPPPPPPPQNGLALDYGGSLYAAGAVQGPVEAGAAANSAANAANSLSAQQPDGSSQIDG
QSGVGSGGGGGGGTAGVDTDDKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN
ERGSKGFGFVTFETSADAERAREKLHGTLVEGRKIEVNNATARVMTNKKMTTPYSNGEGL
ATLPYAGWKLSPMVGAMYSPELYTVPGFPYQAAAAAASTAAATFRGAHLRGRARPVYSAV
RAAVPQPAIPTYPGVMAYQDGFYGAADLYGGYAAYRYAQPAAVATPAAAAAAAAAYSDSY
GRVYTADPYHAALAPAAYGVGAMATLYRGGYSRFAPY
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatccatcatgctgcctgtgtcccggggtctcatggac
cgggatagagagctggacaccatggccggggtgcatccaaacgcgggcggcgctcctgca
gtcgtccggggcatgaagcgcggagacccggagcctgatggacagacagcggctgctctg
gtggattcggccggggcggagtgcaagcgtccacggatcgacggctcgggagggatcggt
gaggttggacagaacaacgacccgttgaccctcggttaccatggctacccgtctcacagt
cagggctctcaggatagtgctggcggtcaggagggactcgtaccaccgcctttctctgcg
tttcctccacctccgccgccgcccccccagaacggccttgccctggattacgggggcagc
ctgtacgcggcgggggccgtccagggccccgtggaagccggcgcagcggcgaacagcgcc
gccaacgctgccaacagcctcagcgctcaacagccagatgggtcctcccagattgacggt
cagtcaggcgttggctcgggcggaggaggcggaggagggaccgctggggtcgacacagac
gacaaggggacccccaaacgcctccacgtgtccaacatccccttccgcttccgagacccc
gacctacggcagatgtttgggcaatttggcaaaatcctcgacgtggagatcatattcaac
gagaggggatccaagggcttcggttttgtaacattcgagacgagcgcagacgcagagaga
gcccgggagaagctccacggtacgctggtggaaggacgtaaaatcgaggtcaataacgcc
acagccagagtgatgacgaacaagaagatgaccaccccgtactcgaacggagagggcctc
gctactctgccatacgctggatggaagttgagtccgatggtcggagccatgtacagtcct
gaactctacacggtaccggggttcccgtaccaggcggctgcagcggccgcctccaccgcc
gccgcgacctttcgaggcgctcatctccggggtcgcgcccggcccgtgtacagcgcggtc
agggcggctgtgccacaaccggccatccccacctacccgggtgtgatggcctatcaggat
ggcttttacggtgcagccgatctctatggtggctatgcagcgtatcgttacgcccagccg
gctgcggtagcgactcctgcggcggcggcagctgcagcggcggcttacagtgacagctac
ggacgagtttacacggcggacccttaccacgctgcgctcgctccagctgcctacggtgtc
ggagccatggccacactgtaccggggaggctacagcagatttgccccttactaa
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