Larimichthys crocea (large yellow croaker): 104938506
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Entry
104938506 CDS
T04659
Symbol
sphk1
Name
(RefSeq) sphingosine kinase 1 isoform X1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00600
Sphingolipid metabolism
lco01100
Metabolic pathways
lco04020
Calcium signaling pathway
lco04148
Efferocytosis
lco04370
VEGF signaling pathway
lco04371
Apelin signaling pathway
Module
lco_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
104938506 (sphk1)
09130 Environmental Information Processing
09132 Signal transduction
04370 VEGF signaling pathway
104938506 (sphk1)
04371 Apelin signaling pathway
104938506 (sphk1)
04020 Calcium signaling pathway
104938506 (sphk1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104938506 (sphk1)
Enzymes [BR:
lco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
104938506 (sphk1)
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GFIT
Motif
Pfam:
DAGK_cat
YegS_C
Tim54
Motif
Other DBs
NCBI-GeneID:
104938506
NCBI-ProteinID:
XP_019110089
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Position
X:27701431..27732829
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AA seq
550 aa
AA seq
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MDQRITEPDHFSPVSLYGEFTLTGNRKVRYAVSLTERDLIVQRLTSTPVGRNKVVLSLKD
CVGCRAYRGDDNADPAAYLAVYLYPLKKRWWMSSGVSRQRVEHCFRLAALQDPRANLEEA
EKWARAVRERSARQQNRDEVSMNKLSRPCRMMLLVNPQSGKGQALTLYNNHIQRMLSEAG
IQHTLVITERQNHARELVREADLSQWDALVIMSGDGLLFEVINGLLERPDWEEAIQIPLG
ILPGGSGNALAASIHHYSGAPQVSSEELLVSCGFLMCKGLVSPMDLVCIHLSSCPRVFSF
LSLAWGFVADVDIESEKYRHVGSARFTVCTLVRLASLRVYKGKLAYLPATDLPKHEEGLR
NKKTLHCNNQPPTSVPGRPSTVSPRVNTFHNSCHSNNSLKVRKVESTPSRSTNISLTGPS
DSLLPPLDQLLPSDWVVVQEEDFVLVLAMYQSHLGEDMMAAPGSTLDEGVIHLFYVRAGI
SRAALLKMFLAMEKGTHLANNCQHLVHAKVRAFRLEPYTPKGIITVDGEVVEYGPVQAEV
HRGLARIITG
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaggataactgaaccggaccacttcagcccggtttcactttacggggaattc
acgctcactggtaaccgaaaagtccggtatgccgtgagcttgaccgagagggacctcatc
gtccagagactcacttcaacacctgtcggacggaacaaggtggtgctcagcctaaaggac
tgcgtcggatgtcgggcttatcggggagacgacaacgcggacccggcagcgtacttggcg
gtgtacttgtacccgctcaaaaaacgttggtggatgagttccggggtgtcgcggcagaga
gtggagcactgctttcgtctcgccgcgctccaggacccgcgcgctaacctggaggaggcg
gagaagtgggctcgcgctgtccgagaacggtctgcccggcaacagaaccgagacgaggtg
tcgatgaacaagttgtctcgtccgtgccggatgatgctgctggtgaacccacaaagcggg
aagggacaggcgctcactctctacaacaaccacatccaacgaatgctcagcgaggcggga
atccaacacactctggttatcactgagaggcaaaatcatgcccgagagctggtgagggag
gccgacctgtcgcagtgggatgctttagtcatcatgtctggagatggacttctgtttgag
gtgataaatggtctgctcgagagaccagactgggaagaggccatccagatcccgcttggt
atccttcctggtggatcaggaaacgccttggctgcatccatacatcactactctggagcg
ccgcaggtgtccagtgaggagcttctagtcagctgtggtttcctgatgtgtaaaggtctt
gtgtctcctatggacctggtctgcattcatctctcctcctgccctcgtgtcttctccttc
ctctcgctagcctggggcttcgtagcggacgtggacatagagagtgagaagtaccgtcat
gttggaagtgctcgcttcactgtctgcacgttggtgaggcttgcttctctccgcgtctac
aagggcaagctggcttacctgcccgccaccgacctgcccaaacacgaggagggtttgaga
aataaaaagacactgcactgcaacaatcaacctccaacctctgtgccgggtcgaccgtcc
acagtctctccccgcgtgaacaccttccacaactcctgccactccaacaactccctcaaa
gtgaggaaggtggagagcacgccttctcgaagcaccaacatatccctcactggcccgtct
gactccctgctgccgcctctggaccagctgctacccagcgactgggtggtggtgcaggag
gaagactttgtcctcgtactggctatgtaccagtcccacctgggagaggacatgatggca
gcaccaggctccactttggatgaaggtgtcatccatcttttctatgttagagcgggaata
tcacgtgccgcactactgaagatgttcctagctatggagaagggtacacatttggctaat
aactgtcaacatctggtgcacgctaaggtgcgtgcattcaggctagagccatatacgccc
aaagggataataacagtagatggagaagtcgtggaatatgggccagttcaagctgaggta
cacagaggcctggcgagaataatcactgggtga
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