Larimichthys crocea (large yellow croaker): 104940326
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Entry
104940326 CDS
T04659
Name
(RefSeq) hairy/enhancer-of-split related with YRPW motif protein 1
KO
K09091
hairy and enhancer of split related with YRPW motif
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104940326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104940326
Transcription factors [BR:
lco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
104940326
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Motif
Pfam:
HLH
Hairy_orange
dCache_2
Motif
Other DBs
NCBI-GeneID:
104940326
NCBI-ProteinID:
XP_010755205
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Position
XIII:17639941..17642166
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AA seq
343 aa
AA seq
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MFKLSHGSSAVSAPLELFCARRTVDHCGLGNKMKRSHNYSSSESDLDDNVEVEKDSGDEN
GQLDSHGSMSPSTTTQVQARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEK
AEILQMTVDHLKMLHASGGKGYFEARALAKDYRSLGFRECLAETARYLSIVEGRESTDPL
RIRLVSHLSNYASQREVHTGLEHLAWGSAYGTAPAHLPHPLLLQHPQGRTPASRSNSSPS
SSSSSSSSTSSSSSSEASGTSRLGVMPPTESLRVPSSSSLSLSLAVPTSKLSPPLLSSLS
SLSAFPLSFGAFPLVSPSTLSTVSPSSTLSKPYRPWGTEIGAF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaactgtcgcacggatcctctgctgtcagtgcgccactggagcttttctgcgca
aggaggactgttgatcactgcgggcttggaaacaaaatgaagcgaagccacaactacagc
tcatccgagagcgacctggacgacaatgttgaggtggagaaggacagtggagacgaaaat
ggtcaacttgattcccacggctccatgtcaccatccacaaccacccaagttcaagcgaga
aaaagacgcagaggaataattgaaaaacggagacgtgacagaatcaataatagtctgtca
gaattgagaagattggtaccaagtgcgtttgagaaacagggatcagctaaattggaaaaa
gcagaaattttgcaaatgactgtggaccatttgaagatgcttcatgcttctggtggcaaa
ggttactttgaggctcgcgctcttgctaaggattaccgcagcctgggcttcagggagtgc
ctggcagagacagcccgctacctgagcatcgtcgagggtcgggagagtacggaccccctc
cggatacgtttggtgtcccacctcagcaactacgcctctcaaagggaggtgcacactggt
ctggaacacttagcctggggctctgcttacgggactgcccctgcccatctcccccaccct
ctcctcctccaacacccccagggcaggacacctgcatccagaagcaacagtagcccatcc
tcctcctcctcctcttcttcctctacatcttcctcctcctctagtgaggcgtctgggacc
tccagactcggtgtcatgccccccacggagtccctaagggtgccttccagcagctcgctg
tccctcagtctggctgtgccaacatccaagctatcgccaccactcctttcatccctctcc
tcgttgtcggccttccccctctcctttggtgctttccctctggtttccccatcgaccctc
agcacagtgagcccctcctccaccctgtcaaagccttacaggccttggggcacggagatt
ggggccttctga
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