Larimichthys crocea (large yellow croaker): 109138208
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Entry
109138208 CDS
T04659
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
109138208
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109138208
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
PRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
U-box
zf-C3HC4_3
zf-RING_2
zf-ANAPC11
Gp58
PRP1_N
DUF2383
Motif
Other DBs
NCBI-GeneID:
109138208
NCBI-ProteinID:
XP_027143379
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Position
XIV:7085580..7088039
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AA seq
558 aa
AA seq
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MAQKGVQLDRETFSCSICLDLLTDPVATPCGHSYCMNCIKIHWDQEDVKGIHSCPQCRQT
FIPRPVLQRNTMLAELVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLKAFKSCLVCL
ASYCEQHLQPHYESPTFKKHKLVEASAKLQDSICSRHDEVMKIFCRTDQRCICIVCSMDE
HKGHDTVSAATERTERQRELEVSRQNIQQRIQDREKDVKELQQEVEAINGSADKAVEDSE
KIFTELIRLMEKRRSDVKQQVRSQQETEVSRVKDLQEKLEQEITELKRKDADLKKLSHTE
DHNQFLHNYPSLSRLSQSTDSSSINIRPLRDFEDVTAAVSELRDKLQDVLRDQRTNISLT
DTEVHVSLSGPEPEPKTRAEFLKYSRELTLDPNTTNTQLLLSEGNRKVTRMNQPQSYSSH
PDRFTNWAQVLSRERLTGRCYWEVELRGRGVSPAVAYKNIRRAERSHECRFGFNVKSWLL
YCGTNSYFFYHNNVQTPVSVPRPSRVGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPL
YAGFHIYPESSAELCKVK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttttcttgttcgatctgtctagat
ctactgacggatccagtggctactccctgtggacacagctactgtatgaactgtattaaa
atccactgggatcaagaggatgtgaagggaatccacagctgtcctcagtgtagacagacc
ttcataccgaggcctgtcctccagagaaacaccatgttagcagagttagtggaggaactg
aagaagactggactccaagctgctcctgcagatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggaagttgaaagccttcaagtcctgtctggtttgtctg
gcttcgtactgtgagcaacatctccagcctcactatgaatctccgacttttaaaaaacac
aaacttgttgaagcctctgctaagcttcaggactccatctgctcccgtcatgatgaggtg
atgaagattttctgccgcactgatcagcggtgtatctgcatcgtctgctcaatggatgaa
cataaaggccacgacacagtctcagctgctacagagaggactgagaggcagagagagctc
gaggtgagtcgacaaaacatccagcagagaatccaggacagagagaaagatgtgaaggag
ctccaacaggaggtggaggctatcaatggctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctcatggagaaaagaaggtctgatgtgaagcagcag
gtcagatcccagcaggaaactgaagtgagtcgagtcaaagatcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgatctgaagaagctctcacacacagag
gaccacaaccagtttctacacaactacccctcactgtcacgactcagccaatctacagac
tcatccagcatcaatatccgtcctctgagggactttgaggatgtgacagctgctgtgtca
gagctcagagataaactacaggacgttctgagggaccaacggacaaacatctcactgaca
gacactgaagtccatgtttcactgtcaggaccagaaccagagcccaagaccagagctgag
ttcttaaaatattcacgtgaactcacactggatccaaacacaacaaacacacagctgtta
ttatctgaggggaacagaaaagtgacaagaatgaatcaacctcagtcttattctagtcac
ccagacagattcactaactgggctcaggtcctgagtagagagagactgactggacgttgt
tactgggaggtggagttgagagggagaggagtttctccagcagtcgcatacaagaatatc
aggagagcagaaagatcacatgaatgtagatttggattcaatgtcaaatcttggttgtta
tattgtggcacaaacagttatttcttttatcacaacaatgtccaaactcccgtctcagtt
cctcggccctccagagttggagtgtacctggatcacagtgcaggtattctgtccttctac
agcgtctctgaaaccatgactctcctccacagagtccagaccacgttcactcagcctctc
tatgctggatttcatatttatcctgaatcctctgctgagttgtgtaaagtcaaatag
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