Larimichthys crocea (large yellow croaker): 109141246
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Entry
109141246 CDS
T04659
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like
KO
K06751
MHC class I antigen
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04144
Endocytosis
lco04145
Phagosome
lco04218
Cellular senescence
lco04514
Cell adhesion molecules
lco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109141246
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109141246
04145 Phagosome
109141246
09143 Cell growth and death
04218 Cellular senescence
109141246
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109141246
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
109141246
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lco00537
]
109141246
Exosome [BR:
lco04147
]
Exosomal proteins
Proteins found in most exosomes
109141246
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lco00537
]
Antigens
109141246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Cadherin_C_2
RE_MjaI
FixQ
ECSCR
ETRAMP
Motif
Other DBs
NCBI-GeneID:
109141246
NCBI-ProteinID:
XP_027142466
LinkDB
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Position
XIII:11002179..11008095
Genome browser
AA seq
366 aa
AA seq
DB search
MNFLLVLLVCHVSSAAKHTLKYFYTATTGVPNVPGFTGILEVNGKLAVYCDSNTRTIEAK
QDWMQDYFNRYPEHLDFYTGQCVAEIDYFKATIDTLTQRFNRTGGVHVLQRLNGCEWDDE
TNEVKYGYNQYGYNGEDFISFHLDTLTWVAPQPQAFTTKLKWDADRPRIKYNKDYLTKIF
PDWLKKYVKHGKSSLTGTELPSVSLLQKTPSSPVTCHATGFYPDRAMMFWRKDEEELHEG
VDHGEILPNGDGTFQMSIDLNLSTISPEDQRRCECVFHLSGVENDIVTRLDDTEIMSNSV
KPGLVIIGSVAAVSALLLIAVIVIAAIGIYHYRKRTAKPSESETPGGSELSVMLNSENPE
QPRDEE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcctcctggtcctgctcgtgtgtcacgtttcttctgcagccaaacacaccctc
aagtacttctacaccgcgaccaccggcgtgccaaacgtgcccgggttcacgggcattctg
gaggtgaacgggaaactggctgtttactgcgacagcaacaccaggaccatcgaggccaag
caggactggatgcaggactacttcaacagataccccgagcacctggacttctacaccggc
cagtgtgtggcggagatagactacttcaaggccaccattgacactctgacccagcgcttc
aaccggacgggaggtgtccatgttttgcagaggctcaacggctgcgagtgggacgacgag
accaacgaggtgaagtacggctataaccagtacggttataacggagaggacttcatatcg
ttccacctagatacgttgacatgggtcgcaccgcaaccgcaggccttcaccaccaaactg
aaatgggacgcagacaggccgagaatcaagtacaataaggattacctcaccaagatcttc
cctgattggctgaagaagtatgtgaagcacgggaagagttctctgacagggacagagctt
ccctcagtgtctctcctccagaagactccctcctctccagtcacctgccatgctacaggt
ttctaccctgacagagccatgatgttctggaggaaagatgaggaggagcttcacgagggt
gtggaccacggagagatcctcccgaacggtgatggaaccttccagatgagcatcgacctg
aacctttcgacaatctcacctgaagaccagaggaggtgcgagtgtgtgtttcatctctct
ggtgtcgagaacgacatcgtcaccagactggacgacacggagatcatgagcaactcggtg
aagcccggtctcgtcatcattggctccgtcgcagctgtatcggctctcctcctcatcgcc
gtcatcgtcatcgctgccattggaatctaccattacaggaagagaacagccaaaccctcc
gaatctgagactcctggcggttctgagctctctgtgatgctgaattcagagaatcctgaa
cagccgagagacgaagaataa
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