Larimichthys crocea (large yellow croaker): 109141846
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Entry
109141846 CDS
T04659
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
109141846
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109141846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4
SPRY
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-ANAPC11
U-box
CCDC47
zf-rbx1
Gp58
PRP1_N
ACCA
Motif
Other DBs
NCBI-GeneID:
109141846
NCBI-ProteinID:
XP_019129306
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MDQNEVQLDRETFSCLICLDLLKDPVTTSCGHSYCMNCIKSYLDDEDEKRIHSCPQCRQT
FTQHKTNMLAALVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLKALKSCLVCLASYC
EKHLQPHHDAAPLKKHKLVEPSKKLQENICSRHAEVMKMFCRTDQQCICYLCPVDEHKGH
DTVSAAAERTERQRELEVSRLNIQQRIQDREKDVKELQQEVEAINGSADKAVEDSEKIFT
ELIRLMEKRRSDVKQQVRSQQETEVSRVKDLQEKLEQEITELKRKDAELEKLSHTEDHNQ
FLHNYPSLSRLSQSTDSSSINIRPLRDFEDVTAAVSELRDKLQDVLRDQRTNISLTDTEV
HVSLSGPEPEPKTRAEFLKYSRELTLDPNTANTQLLLSEGNRKVTLMKQPQSYSSHPDRF
TYWDQVLSRESLTGRCYWEVEWRGGVHVAVTYKNIIRAGSSDECGFGYNDKSWMLHCDTN
SYNFWYNKVRTPVSGPQSSRVGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPLYAGLY
IYSGITAELCEVK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaatgaagttcaactggaccgggaaaccttctcttgtctgatctgtctggat
ctactgaaggatccagtgactacttcctgtggacacagctactgcatgaactgtatcaaa
agctacttggatgatgaggatgagaagagaatccacagctgccctcagtgtaggcagacc
ttcacacagcacaagacaaacatgttagcagctttagtggaggaactgaagaagactgga
ctccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcctgtgatgtc
tgcactgggagaaaactgaaagctctgaagtcctgtctggtctgtctggcctcttactgt
gagaaacaccttcagcctcatcatgatgcagctccattaaagaaacacaagctggtggag
ccctccaagaagctccaggagaacatctgctctcgtcatgctgaggtgatgaagatgttc
tgccgtactgatcagcagtgtatctgttatctctgccctgtggatgaacataaaggccac
gacacagtctcagctgcagcagaaaggactgagaggcagagagagctcgaggtgagtcga
ctaaacatccagcagagaatccaggacagagagaaagatgtgaaggagctccaacaggag
gtggaggctatcaatggctctgctgataaagcagtggaggacagtgagaagatcttcact
gagctgatccgtctcatggagaaaagaaggtctgatgtgaagcagcaggtcagatcccag
caggaaactgaagtgagtcgagtcaaagatcttcaggagaagctggagcaggagatcact
gagctgaagaggaaagacgctgagctggagaagctctcacacacagaggaccacaaccag
tttctacacaactacccctcactgtcacgactcagccaatctacagactcatccagcatc
aatatccgtcctctgagggactttgaggatgtgacagctgctgtgtcagagctcagagat
aaactacaggacgttctgagggaccaacggacaaacatctcactgacagacactgaagtc
catgtttcactgtcaggaccagaaccagagcccaagaccagagctgagttcttaaaatat
tcacgtgaactcacactggatccaaacacagcaaacacacagctgttattatctgagggg
aacagaaaagtgacattaatgaaacaacctcagtcttattctagtcacccagacagattc
acttattgggatcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagtggagaggaggagttcatgtagcagtcacatacaagaatattatcagagcagggagc
tcagatgaatgtggatttggatacaatgacaaatcttggatgttacattgtgacacaaac
agttataacttttggtacaacaaagtccgcactcccgtctcaggtcctcagtcctccaga
gttggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaacc
atgactctcctccacagagtccagaccacgttcactcagcctctctatgctggactttat
atttattctggaatcactgctgagttgtgtgaagtcaaatag
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