Lysobacter capsici: LC55x_1562
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Entry
LC55x_1562 CDS
T04162
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00521
Streptomycin biosynthesis
lcp00523
Polyketide sugar unit biosynthesis
lcp00541
O-Antigen nucleotide sugar biosynthesis
lcp01100
Metabolic pathways
lcp01110
Biosynthesis of secondary metabolites
lcp01250
Biosynthesis of nucleotide sugars
Module
lcp_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LC55x_1562 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LC55x_1562 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LC55x_1562 (rfbC)
Enzymes [BR:
lcp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LC55x_1562 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ALN84853
UniProt:
A0A0S2FN83
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All DBs
Position
1762818..1763375
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AA seq
185 aa
AA seq
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MKIIETDLPGCLIVEPQVFGDARGYFYESFNHDKLAAVGLKPNFVQGNVSSSARGVLRGV
HYQWPNPQGKYVSVIEGEVWDVAVDIRRGSPHFGRWTAVVLSEENKRHFWIPEGFAHGFA
VLSERAVFSYLCTNTYDAKADAGVRWDDPDLAIDWPISEPSLSAKDTNAPLLKDIAQDRL
PVYMP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
ttgaagatcatcgaaaccgatctgccgggctgtctgatcgtcgaaccgcaggtgttcggc
gacgcgcgtgggtatttctacgaatcgttcaatcacgacaaactggcggcggtggggctg
aagccgaacttcgtccagggcaacgtctcgtcctcggcgcgcggcgtgctgcggggcgtg
cattaccagtggcctaatccgcagggcaagtacgtgtcggtgatcgaaggcgaagtgtgg
gacgtcgcggtcgacatccgtcgcggttcgcctcacttcggccgttggaccgctgtggtg
ttgagcgaagagaacaagcgtcatttctggattcccgaaggcttcgcccacggtttcgcg
gtgctcagcgaacgcgcggtgttcagttacctgtgcacgaatacctacgacgccaaggcc
gatgccggcgtgcgctgggacgatccggatctggcgatcgactggccgatcagcgagccc
tcgctgtcggccaaggacaccaacgcgccgctactcaaggacatcgcccaagaccggttg
ccggtgtacatgccatga
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