Lysobacter capsici: LC55x_2857
Help
Entry
LC55x_2857 CDS
T04162
Name
(GenBank) beta galactosidase small chain family protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00052
Galactose metabolism
lcp00511
Other glycan degradation
lcp00600
Sphingolipid metabolism
lcp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
LC55x_2857
09103 Lipid metabolism
00600 Sphingolipid metabolism
LC55x_2857
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
LC55x_2857
Enzymes [BR:
lcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
LC55x_2857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
BetaGal_ABD2
BetaGal_gal-bd
Bac_rhamnosid_N
S4
Motif
Other DBs
NCBI-ProteinID:
ALN86122
UniProt:
A0A0S2FRK3
LinkDB
All DBs
Position
complement(3242825..3246046)
Genome browser
AA seq
1073 aa
AA seq
DB search
MVMRTPIRRVGRGLFVLLALCALAGAQAAPTPQASTQVAEWERPEVNAIDREPMRATSFP
FESVQLARAGRIADSRYFLDLNGDWRFAFAPSVDQRPLDFYRDDFDVSAWKTIPVPSMWQ
AQGYGQPLYNNITYPFPANQPFIPHAINSVGSYRRDFTVPQGWDGRQVLLHIGAAGAAYY
VWVNGKQVGYSEDSKLPAEFDITRHLRAGANNVSIQVYRWSDGSYLEDQDFWRVSGIERD
VYLLAAPSTWLRDFFARTTLDKSYRNGELNLDLSVTGNAAASRVKASVLDGDRVVLTREA
AVEPSSKPRTLNLAGTIEGVRPWTAETPNLYTLLLELHDAGGRLVQASAVKIGFRTVEVS
GGLVRVNGKPIKIRGVNRHEHDPVTFHVISEASMRRDIELMKLNNVNAVRTSHYPNAELW
YALADEYGLYVMDEANIESHGYMQKGDEGLRPRDQVQLGYDPRWERAHLERVQRMMERDK
NHPSIIFWSLGNEAGTGPNFANAANWLHTHDTTRLVSYLGHGTLYAQHLPEPYVDFYAPM
YDPAARIVDYATHPDFAGKPLILCEYAHAMGNSLGGLKLYWDAIYAHDRLQGGFIWDWVD
QSMLKRSEDGRAYWAYGADYGPNPSGAEAIEFGDGLLQPDRTPNPHLHELSKVYGPIQFE
AVDAAAGRFTVRNRHNFIDLSGFDFDWQLRENGRIVREGKGPTLSTPADGSQTVDFAVPP
LTKRPGVEYLLTLRARTRADTVPLVPAGHVVAWEQFALSPPPSLPAVARSGAEVAVSDTA
QAATLRAAGVELRIDRATGLIQRYAYNDQTLLQGGAPNFWRAPTDNDIGTGVYASHQIWK
PLSQTRRVRAVQVQREGDGGARVRVAFDIGGDTAAPDVQYTVDYAMARDGSVDVTGEFKP
LYAGLPDPLRLGLMFTMPSRVTELSWYGRGPHESYADRYTGAEIGVYAGKIAEQNHDYIR
PQETGNKVDVRWLTLSAEDGVGIRVTGAKPLSVNALAFPYDDLDRKPIGQAHSSDIVARE
HVSLMIDERQIGLGGDDSWSKVGQPHSQYRIPVAPSRYQFRITPVQAGTEANR
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgcgcacgcccatccgccgcgtcggtcgcggtctgttcgtgctgctggcgctg
tgcgctctggcgggggcgcaggcggcgcccacgccgcaagcgtccacccaggtggccgaa
tgggagcgtccggaggtcaacgcgatcgatcgcgaaccgatgcgcgctacctcgttcccg
ttcgagtcggtgcaactcgcgcgcgccgggcgcatcgccgattcgcgttacttcctcgac
ctcaacggcgattggcgcttcgcgttcgcgccgagcgtcgaccagcggccgctggatttc
tatcgcgacgatttcgacgtatcggcctggaaaaccatcccggtgccgtcgatgtggcag
gcgcagggctatggccagccgctgtacaacaacatcacctatccgtttccggccaaccag
cccttcatcccgcacgcgatcaattcggtcggatcctatcggcgcgatttcaccgtgccg
caggggtgggatgggcgtcaggtgctgttgcacatcggcgcggccggcgcggcgtactac
gtgtgggtgaacggcaagcaggtgggttacagcgaggactccaagctgccggccgaattc
gacatcacccgccatctgcgcgccggcgccaacaacgtatcgatccaggtgtatcgctgg
tccgacggcagctatctggaggaccaggatttctggcgggtcagcggtatcgagcgcgat
gtctatctgctcgccgcgccgagcacctggctgcgcgacttcttcgcccgcaccaccttg
gacaagagttatcgcaacggcgaactgaatctggacctgagcgtcaccggcaacgccgcg
gcgagccgggtcaaggccagcgtgctcgatggagaccgcgtcgtgctgacgcgcgaggcg
gcggtcgagccgtcgtcgaaaccgcgcacgctgaacctggcgggcacgatcgaaggcgtg
cgcccgtggaccgcggaaacgccgaacctctacaccttgctgctggagctgcacgatgcc
ggcggccgcctggtgcaggccagcgcggtcaagatcggctttcgcacggtcgaggtgtcc
ggcggtctggtgcgggtcaacggcaagccgatcaagatccgcggggtcaatcggcacgag
catgacccggtgacctttcatgtgatctccgaggcctcgatgcggcgcgacatcgagttg
atgaaactcaacaacgtcaacgcggtgcgaacctcgcattaccccaacgccgagctttgg
tatgcgctggccgacgagtacggcctgtacgtgatggacgaggccaatatcgaatcgcac
ggctacatgcagaagggtgacgagggcctgcggccgcgcgatcaggtccagctgggctac
gacccgcgctgggaacgcgcgcatctggagcgggtccagcgcatgatggagcgcgacaag
aaccatccttcgatcatcttctggtcgctgggcaacgaagccggcaccgggccgaacttc
gccaacgcggcgaactggttgcacacgcacgacaccacgcggctggtgagctacctcggc
cacggcaccttgtatgcccagcacctgcccgaaccctacgtggatttctacgcgccgatg
tacgacccggccgcgcgcatcgtcgattacgcgactcacccggatttcgcgggcaagccg
ctgatcctgtgcgagtacgcgcacgcgatgggcaacagcctgggcggcctcaagctgtac
tgggatgcgatctacgctcacgaccggctgcagggcggttttatctgggactgggtcgac
cagagcatgctcaagcgcagcgaagacggccgcgcgtactgggcttatggcgccgattac
ggccccaatccgtccggcgcggaggcgatcgaattcggcgacggcctgctgcaacccgat
cgcacgcccaacccgcatctgcacgaattgagcaaggtctacgggccgatccagttcgaa
gccgtggacgccgcggccggccgcttcaccgtgcgcaaccggcataacttcatcgatctg
agcggtttcgatttcgactggcaactgcgcgagaacggccggatcgtgcgcgaaggcaag
gggccgaccttgtccacgcccgccgacggcagccagacggtcgacttcgctgtgccgccg
ctgaccaagcgccccggcgtcgaatacctgctgacattgcgcgcgcgcacccgcgccgac
acggtgccgctggtgccggccgggcatgtggtggcgtgggagcagttcgccttgtcgccg
ccgccgtcgttgccggccgtcgcgcgttcgggcgccgaagtcgcggtcagcgatacggcg
caggccgcgaccctgcgcgccgccggcgtcgaactgcgtatcgatcgcgccaccggcctg
atccagcgttacgcctacaacgatcaaaccctgctgcaaggcggcgcgccgaatttctgg
cgcgcgcccaccgacaacgacatcggcaccggcgtctacgccagtcatcagatctggaaa
ccgctgtcgcaaactcgccgcgtccgcgccgtgcaggtgcaacgcgagggcgacggcggc
gcgcgggtgcgggtggcgttcgatatcggcggcgataccgccgcgccggacgtgcagtac
acggtcgattacgcgatggcgcgcgacggttcggtcgacgtcaccggcgagttcaagccc
ttgtacgccggcttgcccgatcccttgcgcctggggctgatgttcaccatgcccagccgc
gtcaccgagctgagctggtacggccgcggcccgcacgagagctacgccgatcgctacacc
ggcgccgagatcggcgtgtatgccggcaagatcgccgagcagaaccacgactacatccgc
ccgcaggaaaccggcaacaaggtcgatgtgcgctggctcacgctgagcgccgaggacggc
gtcggcatccgggtgaccggggccaagccgctgtcggtcaatgccttggccttcccgtac
gacgatctggaccgcaagccgatcgggcaggcgcacagcagcgacatcgtcgcgcgcgag
cacgtctcgctgatgatcgacgaacgccagatcggcctgggcggcgacgattcgtggagc
aaggtcggccagccgcattcgcagtaccgtattccggtggcgccttcgcgctaccagttc
cgcataacgccggtccaggccggtaccgaggcgaatcgatga
DBGET
integrated database retrieval system
