Lysobacter capsici: LC55x_2898
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Entry
LC55x_2898 CDS
T04162
Name
(GenBank) carbohydrate-selective porin, OprB family protein
KO
K07267
porin
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_2898
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_2898
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
ALN86163
UniProt:
A0A0S2FRY5
LinkDB
All DBs
Position
complement(3297629..3298939)
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AA seq
436 aa
AA seq
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MPALLKNPLHASLLLALFGVVAQAPASAQEDSPYLLGDWGGKRTALADRGVSFEFGHTSE
TARNRSGGQRELTRYTDQWKLGAVVDLDKTWGWTGSAFQLMFTHRGGDNLGADAGIGNNQ
LIQEVYGRGQTWHLTVFALSQDLFGGKANLRIGRLPVGEDFAGFSCDFMSLTFCGAPPGN
IAGDYWVNWPTSQWAARIKLDTGADTYLKIGAYQLNPKYVDDAYAKRNGWKPDFPSGTTG
ALIPVEFGWTPKLGGRPGSYKIGGWYSNAGGADLFYDRTGQPRALTGGDALHRGSRYGGF
LSFQQQLSGESGRNGASVFLNLTQADRNTSSTDRQIAVGVTYKGVFQRPNDYVGLAFGAT
HAGPRAADHQRLFNRLHPQSAAPVKDGNEYVTELFYNWSPIASVSLRPNLQYIRHPGGTD
ANRDALILGLKTNIDF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctttactcaaaaatccgcttcacgcttccttgttgctggcgctgttcggcgtc
gtcgcccaggcgccggcgagcgcgcaggaggacagtccgtatctgctcggcgactggggc
ggcaaacgcaccgcgctggccgatcgcggcgttagcttcgaattcggacacaccagcgaa
accgcgcgcaaccgcagcggaggtcagcgcgaactgacccgttacaccgatcaatggaaa
ctcggcgccgtcgtcgacctcgacaagacctggggctggaccggcagcgcgttccagctg
atgttcacccatcgcggcggcgacaacctcggcgccgatgccggcatcggcaacaaccag
ctcatccaggaagtctatggccgcggccaaacctggcatctgaccgtgttcgcgctgagc
caggacctgttcggtggcaaggccaatctgcgcatcggccgcttgccggtcggcgaggac
ttcgccggtttcagctgcgatttcatgagcctgaccttctgcggcgcgcctccgggcaat
atcgccggcgattactgggtgaactggccgaccagccaatgggcggcgcggatcaagctc
gacaccggtgccgacacttatctgaaaatcggcgcgtaccagctcaatccgaagtacgtc
gacgacgcctacgccaagcgcaacgggtggaaacccgatttcccgtcgggcaccaccggc
gcgctgattccggtcgagttcggctggacgccgaagctcggcggccgaccgggcagctac
aagatcggtggctggtacagcaacgccggcggcgcggatctgttctacgaccgcaccggg
cagccgcgcgcgttgaccggcggcgatgcgctgcatcgcggcagccgttacggcgggttc
ctgtcgttccagcaacaactcagcggcgaaagcggccgcaacggcgcgagcgttttcctc
aatctgacccaggccgaccgcaacacctcgtcgaccgatcgccagatcgcggtgggcgtg
acctacaagggcgtgttccagcggcccaacgattacgtcggcctggccttcggcgccacc
cacgccggcccgcgcgcggccgatcatcagcgtctgttcaataggctgcatccgcagtcg
gcggcgccggtcaaggacggcaacgagtacgtgaccgagctgttctacaactggtcgccg
atcgcctcggtgtcgctgcggcccaatctgcagtacatccgtcatcccggcggtaccgat
gcgaatcgcgatgcgttgatcctcgggttgaagaccaatatcgacttctga
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