Lysobacter capsici: LC55x_3029
Help
Entry
LC55x_3029 CDS
T04162
Symbol
trpB
Name
(GenBank) tryptophan synthase, beta subunit
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00260
Glycine, serine and threonine metabolism
lcp00400
Phenylalanine, tyrosine and tryptophan biosynthesis
lcp01100
Metabolic pathways
lcp01110
Biosynthesis of secondary metabolites
lcp01230
Biosynthesis of amino acids
Module
lcp_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LC55x_3029 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
LC55x_3029 (trpB)
Enzymes [BR:
lcp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
LC55x_3029 (trpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
ALN86292
UniProt:
A0A0S2FS41
LinkDB
All DBs
Position
complement(3457941..3459167)
Genome browser
AA seq
408 aa
AA seq
DB search
MSAEPIAPPIDFHAYPDANGHFGRYGGRFVAETLIAPIEELAKAYDAARVDPAFIKEFEN
DLAHYVGRPSPIYHAQRLSDEVGGARILLKREDLNHTGAHKINNTIGQALLASRMGKTRI
IAETGAGQHGVASATVAARLGLECVVYMGATDIERQKINVYRMKLLGATVVPVTSGSQTL
KDALNEAMRDWVTNVRDTFYIIGTVAGPDPYPRMVRDFNAVVGREARAQMLAEYGRLPDA
ITACVGGGSNAIGLFHAFLNDPSVRIVGAEAAGDGIDTGRHAASLAAGRPGVLHGNRTYV
LCDDDGQIIETHSVSAGLDYPGVGPEHAFLKDTGRAEYLGITDEEALDAFRTLARTEGIL
AALESSHAIAQAIKLARTMPKDQVVLCNLSGRGDKDVHTIAGREGLHF
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgaaccgatcgccccgccaatcgacttccatgcctatcccgacgccaacggc
cacttcggtcgctacggcggacgcttcgtcgccgagaccctgatcgcgccgatcgaggag
ctggccaaggcctacgacgccgcgcgcgtcgacccggccttcatcaaggaattcgaaaac
gacctggcccattacgtcggccggccgagcccgatctaccacgcccagcgattgagcgac
gaagtcggcggcgcgcggatcctgctcaagcgcgaagacctgaaccacaccggcgcgcac
aagatcaacaacaccatcggtcaggccctgctggccagccgcatgggcaagacccgcatc
atcgccgagaccggcgccggccagcacggcgtcgccagcgccaccgtggccgcgcgcctg
ggcctggaatgcgtggtctacatgggcgcgaccgacatcgagcggcagaagatcaacgtc
taccgcatgaagttgctcggcgcgaccgtggtgccggtgaccagcggttcgcagacgctc
aaggacgcgctcaatgaagcgatgcgcgactgggtgaccaacgtgcgcgacaccttctac
atcatcggcaccgtcgccggccccgatccgtacccgcgcatggtccgcgacttcaacgcc
gtggtcgggcgcgaggcgagggcgcagatgctggccgaatacggccgcctgcccgatgcg
atcaccgcctgcgtcggtggcggcagcaatgccatcggtttgttccatgcgttcttgaac
gatccttcggtgcgcatcgtcggcgccgaagcggccggcgacggcatcgacaccggccgc
cacgccgcctcgctcgccgccggacgcccgggcgtgctgcacggcaaccgtacctatgtg
ctgtgcgacgacgacggccagatcatcgaaacccattcggtctccgcgggcctggattac
cccggcgtcggccccgagcatgcgttcctcaaagacaccggccgcgctgagtacctcggc
atcaccgacgaggaagcgctggacgcgttccgcaccctggcgcgcaccgaaggcatcctg
gccgcgcttgagtccagccacgcgatcgcgcaggcgatcaagctcgcgcgcacgatgccg
aaggaccaggtggtgttgtgcaacctgtccggtcgcggcgacaaggacgtgcataccatc
gccgggcgcgaaggcttgcacttctga
DBGET
integrated database retrieval system
