Lysobacter capsici: LC55x_3906
Help
Entry
LC55x_3906 CDS
T04162
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00020
Citrate cycle (TCA cycle)
lcp00270
Cysteine and methionine metabolism
lcp00620
Pyruvate metabolism
lcp00630
Glyoxylate and dicarboxylate metabolism
lcp00680
Methane metabolism
lcp01100
Metabolic pathways
lcp01110
Biosynthesis of secondary metabolites
lcp01120
Microbial metabolism in diverse environments
lcp01200
Carbon metabolism
Module
lcp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lcp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lcp_M00012
Glyoxylate cycle
lcp_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LC55x_3906 (mdh)
00620 Pyruvate metabolism
LC55x_3906 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
LC55x_3906 (mdh)
09102 Energy metabolism
00680 Methane metabolism
LC55x_3906 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LC55x_3906 (mdh)
Enzymes [BR:
lcp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
LC55x_3906 (mdh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Glyco_hydro_3_C
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
ALN87163
UniProt:
A0A0S2FUC2
LinkDB
All DBs
Position
complement(4357376..4358362)
Genome browser
AA seq
328 aa
AA seq
DB search
MKTPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLELPLEKAQAALKGVIMELE
DCAFPLLAGVVGTDDAEVAFKDADVALLVGARPRGPGMERKDLLLENAKIFTAQGTALNK
VASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLAAKAGVAVGDI
ENLVVWGNHSPTMYPDYRFATVNGQSLKDKINDADWNANTFIPQVGKRGAAIIEARGLSS
AASAANAAIDHIRDWVLGSNGKWVTMGVPSDGSYGIPETVMYGVPVITENGEYKRVEGLE
VDAFSRAAMDKTLAELEEERAGVAHLLG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaagacccccgtccgcgttgccgtcaccggtgctgccggccagatcggctactcgctg
ctgttccgcatcgcttccggcgaaatgctcggcaaggatcagcccgtcatcctgcagttg
ctggaactgccgctggagaaggcccaggccgcgctcaagggcgtgatcatggagctggaa
gactgcgcgttcccgctgctggccggcgtggtcggcaccgacgacgccgaagtcgcgttc
aaggacgccgacgtggccctgctggtcggcgcgcgtccgcgcggcccgggcatggagcgc
aaggacctgctgctggaaaacgccaagatctttaccgcccagggcacggcgttgaacaag
gtcgcctcgcgcaacgtcaaggtgctggtggtcggcaatccggccaacaccaacgcctac
atcgcgatgaagtcggcgccggacctgccggccaagaacttcaccgcgatgctgcgcctg
gaccacaaccgcgcgctgagccagctcgccgcgaaggccggcgtggccgtgggcgacatc
gagaacctggtggtgtggggcaaccacagcccgaccatgtacccggactaccgcttcgcc
accgtcaacggccagtcgctgaaggacaagatcaacgacgccgactggaacgcgaacacc
ttcatcccgcaggtcggcaagcgcggcgcggcgatcatcgaagcgcgcggcctgtcgtcg
gcggcgtcggcggccaatgccgcgatcgaccacattcgcgactgggtgctcggcagcaac
ggcaagtgggtgaccatgggcgtgccgtccgacggcagctacggcattccggagacggtg
atgtacggcgtgccggtgatcaccgaaaacggcgagtacaagcgcgttgaaggtctggaa
gtggacgcgttcagccgcgccgcgatggacaagaccctggccgagctcgaggaagagcgc
gccggcgtggcgcatctgctgggttga
DBGET
integrated database retrieval system