Lysobacter capsici: LC55x_4337
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Entry
LC55x_4337 CDS
T04162
Name
(GenBank) DNA polymerase III chi subunit, HolC family protein
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
lcp
Lysobacter capsici
Pathway
lcp03030
DNA replication
lcp03430
Mismatch repair
lcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC55x_4337
03430 Mismatch repair
LC55x_4337
03440 Homologous recombination
LC55x_4337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcp03032
]
LC55x_4337
03400 DNA repair and recombination proteins [BR:
lcp03400
]
LC55x_4337
Enzymes [BR:
lcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LC55x_4337
DNA replication proteins [BR:
lcp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LC55x_4337
DNA repair and recombination proteins [BR:
lcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LC55x_4337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
ALN87587
UniProt:
A0A0S2FW64
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All DBs
Position
4809989..4810354
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AA seq
121 aa
AA seq
DB search
MVCELTRKAHDAGLSTLILARSAEQAEQLDDMLWDMGEDAYIPHQIAGMDEDEDEADVLI
ATPDSQAALRALVINLRDAAVADGFERVLEVVPADDSARGPLRERWKQYQARGLALNKHD
M
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
ttggtctgcgaactgacgcgcaaggcgcacgacgccgggctgtcgacgctgatcctggcg
cgcagcgccgagcaggccgaacagctcgacgacatgctgtgggacatgggcgaggacgcc
tacatcccgcaccagatcgccggcatggacgaggacgaggacgaagccgacgtgctgatc
gccacgcccgactcgcaggccgcattgcgcgccctggtcatcaacctgcgcgatgccgcg
gtcgccgacggcttcgagcgcgtgctcgaagtggtccccgccgacgactccgcgcgcggc
ccgctgcgcgagcgctggaagcagtaccaggcgcgcgggctggctttgaataagcacgat
atgtga
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