Lysobacter capsici: LC55x_5205
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Entry
LC55x_5205 CDS
T04162
Name
(GenBank) type VII secretion system (T7SS), usher family protein
KO
K07347
outer membrane usher protein
Organism
lcp
Lysobacter capsici
Pathway
lcp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LC55x_5205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_5205
02044 Secretion system [BR:
lcp02044
]
LC55x_5205
02035 Bacterial motility proteins [BR:
lcp02035
]
LC55x_5205
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_5205
Secretion system [BR:
lcp02044
]
Chaperone-usher system
Type 1 pilus assembly protein
LC55x_5205
Bacterial motility proteins [BR:
lcp02035
]
Pilus system
Fimbrial proteins
LC55x_5205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_C
Motif
Other DBs
NCBI-ProteinID:
ALN88452
UniProt:
A0A0S2FY12
LinkDB
All DBs
Position
5789842..5792208
Genome browser
AA seq
788 aa
AA seq
DB search
MPAGLLLASQLGHAAEPPPLAVLRAGEALGGGSLSATAAAANMALYLEVSLNQTAYGPPQ
PFELRDGRLYASVATLRAIGFRLDGHDSGETLAPDRLAGVSVRYDAASQRVAIDAPLSLL
SLATTRLNAPGADVPVASASPGLLFNYDLYSSRDRHSDSTSAFAELRVFGLGSGVFSQTA
VTRSHQNEDDPRRTDSVRLDSSWRWSAPASMVSVTVGDVISGQLDWTRPLRLGGIRIGRD
FGLQPYRITTPLPTLLGEVAVPSAVDLYVNGIRQYSGELSPGPFQLATIPGITGAGNAQL
VVTDAFGRTRTLDFPFYAAQQLLAKGLSDGSLSLGLAREDYAIRSFAYGDEPLLSGDLRY
GVSDRFTVEAHGEGGDGVVNGGVGGVWLLGQAGVISGSLAHGRDGDDGGWLYAAAYNWSN
GRFNISADTQRTRGDYRDLASRYGLGAPRVSERAVASWSDTRLGSLGLSYVRLIYRDEPA
ARYASATWNRSFGGRAALSLSYNQNLDRGEDRNVYLGFTLNLQNRDRRASTQISVSAQRS
RDRDQGVIDLSRPVPGDGGFGWRVQARGGDGEEGGLAEAGWLTSYGRFNFGVARQGDNDY
GYASASGSLVWMGGHAFAARNVSDAFAVVSTGGVADVPVLLENRPIGRSDRDGMLLVTPL
NAWQRNRIAIDPMELPADVQLGEVEVQATPKDRSGTLVRFAIDKIRPAVLVLRDASGQPL
PLGSRVRLSDGGEAIVGYDGEAYLDRVGDANDLRVDTPSGACRVRFAYPRGPGIPRIGPL
SCVPERSP
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgccggccggcctgctcctggcgtcgcagctgggccacgcggcggaaccgccgccgctg
gcggtgctgcgcgcgggcgaagcgctgggtggcggatcgctgagcgccaccgcggcggcg
gcgaacatggcgctgtacctggaagtcagcctcaaccagaccgcgtacgggccgccgcag
ccgttcgagctgcgcgacggccgcctgtacgccagcgtcgccaccctgcgcgcgatcggc
ttccgcctcgacggccacgacagcggcgaaaccctggcccccgaccgcctggccggcgtc
agcgtgcgctacgacgccgccagccagcgggtcgcgatcgacgcgccgctgtcgctgctg
tcgctggcgaccacccggctcaacgcgcccggcgccgatgtcccggtcgccagcgcctcg
cccgggctgctgttcaactacgacctgtactccagccgcgaccgccacagcgacagcacc
agcgcgttcgccgaactgcgcgtgttcggcctcggcagcggcgtgttcagccagaccgcg
gtgacccgcagtcaccaaaacgaggacgacccgcgccgcaccgactcggtgcgcctggac
agcagttggcgctggtcggcgccggcctcgatggtcagcgtcaccgtcggcgacgtgatc
agcggccagctcgactggacccggccgctgcgcctgggcgggatccgcatcggccgcgac
ttcggcctgcagccctaccgcatcaccaccccgctgccgaccctgctgggcgaagtcgcg
gtgccgtcggcggtggacctgtacgtcaacggcatccgccaatacagcggcgagctgtcg
cccgggccgttccagctggcgacgattcccggcatcaccggcgccggcaacgcgcaactg
gtggtcaccgatgcgttcggccgcacccgcaccctcgacttcccgttctatgccgcgcaa
cagctgctggccaagggcctgtcggacgggtcgctgagcctgggcctggcgcgcgaggac
tacgcgatccgttcgttcgcctacggcgacgaacccttgctcagcggcgacctgcgttac
ggcgtcagcgaccgcttcaccgtcgaggcgcatggcgaaggcggcgacggcgtggtcaac
ggcggcgtgggcggggtgtggctgctcggccaggccggggtgatcagcggttcgctcgcg
cacggccgcgacggcgacgacggcggctggctgtatgcggcggcgtacaactggagcaac
gggcgcttcaatatctccgccgacacccaacgcacccgcggcgactaccgcgatctcgcc
tcgcgttacggactgggcgcgccgcgcgtgagcgaacgcgcggtggcgagctggagcgat
acgcgcctgggcagcctcggcctgagctatgtgcgcctgatctatcgcgacgaaccggcc
gcgcgctacgccagcgcgacctggaaccgcagcttcggcggccgcgccgcgttgagcctg
tcgtacaaccagaacctcgatcgcggcgaggaccgcaacgtctacctgggtttcaccctg
aacctgcagaaccgcgaccgccgcgccagcacccagatcagcgtgtcggcgcagcgcagc
cgcgatcgcgaccagggcgtgatcgacctcagccgcccggtgccgggcgacggcggcttc
ggctggcgggtgcaggcgcgcggcggcgatggcgaggaaggcggcctggccgaagcgggt
tggctgacctcgtacggccgcttcaactttggcgtcgcgcgccagggcgacaacgattac
ggctacgccagcgccagcggttcgctggtgtggatgggcggccacgccttcgccgcgcgc
aacgtcagcgacgcgttcgcggtggtgtccaccggcggcgtggccgacgtgccggtgctg
ctggaaaaccgaccgatcggccgcagcgatcgcgacggcatgctgctggtcaccccgctc
aatgcctggcagcgcaaccgcatcgcgatcgatccgatggaactgccggccgatgtgcag
ctcggcgaggtcgaagtgcaggcgacgccgaaggatcgctccggcaccctggtgcgtttc
gcgatcgacaagatccgcccggcggtattggtgctgcgcgatgcatccggccagccgctg
ccgctgggcagccgcgtgcgcctgagcgatggcggcgaggcgatcgtcggctacgacggc
gaggcctacctcgatcgcgtgggcgacgccaacgacctgcgcgtcgacacgccgagcggc
gcgtgccgggtgcgcttcgcgtatccgcgagggccgggcatcccgcgcatcggcccgctg
agctgcgtaccggagcgatcgccatga
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