Lysobacter capsici: LC55x_5338
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Entry
LC55x_5338 CDS
T04162
Name
(GenBank) fimbrial isopeptide formation D2 domain protein
Organism
lcp
Lysobacter capsici
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPCBM_assoc
DUF11
OmpA
GramPos_pilinBB
Motif
Other DBs
NCBI-ProteinID:
ALN88584
UniProt:
A0A0S2FY67
LinkDB
All DBs
Position
complement(5954282..5961430)
Genome browser
AA seq
2382 aa
AA seq
DB search
MLSLCVGLQAHAQFKVSENFRNSTAPGWTIIGTDNGFGDPTFNSGVLTSGRFLPEGITDS
DGDGWLRLTQNMNNQVSSALYTGGSFSGAMGVFMEVDYVSWGGDGADGLSFFLWDTSKSM
ADAGFGGGLGYCDGSASYLGVGLDEWGNFSSLADPNVPQQCNSDGPGFIADRMVLRGPMS
SNNQYVGGTPVPAGIDDPGSQPERPVASKVRVALVPNGTGGYRVSAAFGSRGAEPTTLLN
FLDFPFPAPAQLSVGFAGSTGDSVNVHEVRDAVLSTPADIVVTKDVSAASIARGQPVTYT
VKFRNNDINPVDPGEQSPPIDSANAPDIVDTLPAQLTGASWTCSASAGSTCPAANGSGNL
DFENGYSFAPGGELTFTITATVLPATACGATVSNTAAADFSATDGFADINLADNHDDASF
TVVCPTVTYAKAATLPGAQTNVVPGDTISYTLTTTVANWPTSDVLTLTDTLGTGLSFGVV
TSTGNYTCNAESPIVCTLPAGTAVGSYAVTYTATVNSQAGSTVNNAVTGAGTDAPTCPAN
NCSINTPVTKPVVTYAKAASLPGGQTAAAVGDTITYTVTTTVADAATSAVVTLTDTLSTG
LTFGVEGDDGDYTCTRSGSTLTCTLPAGTAPGTYPLIYTATVNSQAGATVNNAVVGTGAD
APTCPANDCSVTTPVSVPAIDAVNDTPPAVGGVSGGSAGNVYGNDTLNGAPVNPADVNGT
VLTPATPINGGPVPTLDPVTGEVTVPAGTPAGTYTITYQICEKLNPSNCDQATVTVPVTS
VPIDAVDDTPPAVGGVSGGSAGNAYGNDTLNGAPVNPADLNGTVLTPATPINGGPVPTLD
PVTGEVTVPAGTPAGTYTITYQICEKLNPSNCDQATVTVPVTAVPIDAVNDTQPAVGGVS
GGSAGNAYGNDTMNGAPVNPADVNGTVLTPATPINGGPVPTLDPVTGEVTVPAGTPSGSY
TITYQICEKLNPSNCDQATVTVPVTAVPIDAVNDTPPAVSGVSGGSAGNAYDNDSLNGAP
VNPADLNGTVLTPATPINGGPVPTLDPVTGNVTVPAGTPAGNYTITYQICEKLNPSNCDQ
ATVTVPVTAATINAENDTPPAVSGTTGGSAGNAYDNDSLNGAPVNPAGLNGTVLTPATPI
NGGPVPALDPVTGNVTVPAGTPAGNYTITYQICEKLNPSNCDDATVTVPVTAPVIDAVDD
GFGPVPGTNGGNAGNAYDNDTLGGAPVDPADVNGTVLTPATPINGGPVPTLDPATGNVTV
PAGTPAGNYTITYQICEKLNPSNCDQATATVPVTAPVIDAVDDGFPPVPGANGGNAGNAY
DNDTLGGTPVDPADVNGTVLTPATPINGGPVPTLDPATGNVTVPAGTPAGNYTITYQICE
KLNPSNCDQATVTVPVTAPVIDAVDDGLGPVPGTNGGNAGNAYGNDTLGGAPVDPADVNG
TVLTPATPINGGPVPTLDPATGNVTVPAGTPAGNYTITYQICEKLNPSNCDQATVTVPVT
APVIDAVDDDFAPTPGTNGGNVGNAYNNDRLNGAPVDPTNVTGTVLTPATPINGGPVPML
DPATGNVMVPPGTPAGTYTITYQICEKLNPSNCDQATVTVAVAPPTIDTVDDDFAPTPGT
IGGTAGNAYDNDKLNGAPVDPASVTGTVLTPATPINGGPVPTLDPATGNVMLPPGTPGGT
YTIRYQICEKLNPSNCDQATVTVVVTAPVIDAVDDRSPQIDGSVGGNAGNAYTSDTLNRV
AVNPADIVGSVITPATSAGVVLDPATGNVSVARGTQGGTYTIRYQICERLNPSNCDQATV
TVVVVNPAQIRVLKTAAVRTGKIGDLIRYTLTVENVGSANLIDGYIVDTPPAGFSYVAGS
LQASDDDSLAVVSGQSPLRFGDIDLAAGKRATLVYLMRIGSGVRPGTQVNSAQAYDDGGK
PVSNIATAEIQIESDSLIDDSLVFGTVFNDRDRDGWQDSAALSGVRVQGGFAPESYIANS
TTVDRGAGPQSEPDASSPMLHGVEVGAISARQSPADPVEAHRVVIRQRLRELSFTDDFVL
TSAQGVTVRMDAAGKTTVAKTGEAAKGLNVAEPTVERRVAVAEGGYVVDYVIGNAGIDEN
GIPGVRIASVEGLLIETDQFGRYHLANVPGGTWERGRNFILKVDPSTLPTGSEFTTDNPL
LRRITPGIPVRFDWGVKLPEQVIGGGEGRVELELGEVFFAPGSAEVREQYLQVVDTMAAK
VREYRGGEVVINANGENEGLAFKRADAIKAALLERLDKQAAKALVISVRADVDNPSSMVV
GVAEGGALLGTLLFDTDKSAIRPEFEPLLDQVAASLERMGGGSIAVVGHTDLRASYQYNV
ALGMRRAQAVYEALAKRLSPQVRAKVRVEANNNPAASVGATR
NT seq
7149 nt
NT seq
+upstream
nt +downstream
nt
ttgctgtcgctatgcgtcggccttcaggcgcatgcgcagttcaaggtcagtgagaacttc
aggaacagcaccgcgccgggctggaccattatcggtaccgataacggtttcggcgatccc
acgttcaacagtggtgtacttaccagcggccggttcttgcccgagggtatcaccgactcc
gacggcgacggctggctgcgcttgacgcagaacatgaacaaccaagtgagctcggcgctc
tacaccgggggctcgttcagcggcgccatgggcgtgtttatggaggtcgattatgtctcc
tgggggggcgacggcgccgatggcctgagtttcttcctttgggacacctccaagagcatg
gccgacgccggtttcggcggcggcctgggctattgcgacgggtcggcgagctatctgggc
gttggcctggacgagtggggcaatttttcgagccttgccgatcccaacgttccgcaacag
tgcaattccgacggcccaggtttcatcgcggaccgcatggtgctgcgcgggccgatgagc
tcgaacaaccagtatgtgggcggtactccggtgcccgcgggtatcgacgacccaggctcc
caacctgaaaggccagtggcgtcgaaggtgcgagtggcgctggtacccaacggtacgggt
ggctaccgcgtgtcagcggcgttcggctcgcgcggcgccgaaccgactaccttgctgaac
tttctagatttcccatttcccgctccggcacaactgtcagtcggttttgcaggctcgact
ggcgacagcgttaacgtccatgaggtgcgcgacgccgtcctctcgacgccggcggacatc
gtggtgaccaaggatgtgtccgccgcgtcgatcgcgcgcgggcagccggtcacctacacg
gtgaagttccggaataacgatatcaacccggtcgatccgggcgagcagtcgccgccgatc
gattcggccaatgcgccggacatcgtcgacacgcttcccgcacaactgaccggggcgagt
tggacctgctcggctagcgccggctcaacctgtcctgccgccaacggttcgggcaacctc
gactttgagaacggttacagcttcgcgccgggcggcgagctgacgttcaccatcaccgcc
acggtcctgccggccactgcctgcggcgccaccgtgagcaataccgccgcggcggatttc
tccgctaccgacggtttcgccgacatcaacctggccgacaaccacgacgatgccagcttt
accgtggtctgcccaaccgtgacctacgccaaggcggctacgctgccgggcgcgcagacc
aacgtcgtgccaggcgacacgatcagctacaccctgaccaccacggtcgcgaattggcca
acctcggacgtgctgacgctcaccgataccttgggcacgggcctgagcttcggcgtggtc
accagcacgggcaattacacctgcaacgcagagagccccatcgtgtgcacgctgccggca
ggtacggcggtgggcagttatgcggtgacctacaccgcgacggtgaacagccaggccggc
agcacggtcaataatgccgtgaccggtgcgggtaccgatgccccgacctgtccggccaac
aattgcagcatcaacacgccggtgactaagccggtagtgacctatgcgaaggccgcgtcc
ttgccgggcgggcagacggcagcggcggtgggcgacaccattacctataccgtcaccacg
acggtagccgatgcggcgacctcggcggtcgtcacgttgaccgataccttgagcaccgga
ctgacgttcggtgtcgaaggcgacgacggcgactacacctgcacgcgttcgggcagcact
ctgacctgcacgctgccggccggcaccgcgccgggtacttatcccttgatttatacggcg
acggtgaacagccaggccggtgccacggtcaacaatgccgtggtcggcaccggtgcggat
gctccgacctgtccggccaacgattgcagcgtcaccactccggttagcgtgccggcgatt
gacgcggtgaacgacacgccgcctgcggttggcggcgtcagcggcggaagcgccggcaat
gtctacggcaacgacaccttgaacggtgcgccggtgaatccggccgacgtcaacggcaca
gtgctgaccccggcgaccccgatcaacggcggcccggtgccgaccttggatccggtgacg
ggcgaagtgacggtgccggccggtacgcctgcgggtacgtacacgatcacctatcaaatc
tgcgagaagctcaacccgagcaactgcgaccaagccacggtgaccgtgccggtgacctcg
gttccgatcgacgcggtggacgacacgccccctgcggtcggcggcgtcagcggcggcagc
gccggcaatgcctacggcaacgacaccttgaacggtgcgccggtgaacccggccgacctc
aacggcacggtgctgaccccggcgaccccgatcaacggcggcccggtgccgaccttggat
ccggtgacgggcgaagtgacggtgccggccggtacgcctgcgggtacgtacacgatcact
tatcaaatctgcgagaagctcaacccgagcaactgcgaccaagccacggtgaccgtgccg
gtgactgcggttccgatcgatgcggtgaacgacacgcagcccgcggtcggcggcgtcagc
ggcggcagcgccggcaatgcctacggcaacgacaccatgaacggtgcgccggtgaacccg
gccgacgtcaacggcacggtcctgaccccggcgaccccgatcaacggcggcccggtgccg
accttggatccggtgacgggcgaagtgacggtgccggccggtacgccgtcgggcagctac
acgatcacctaccagatctgcgagaagctcaacccgagcaactgcgatcaggctacggtg
acggtgccggtgaccgcggttccgatcgatgcggtgaacgacacgccgcctgcggtcagc
ggggtcagcggcggcagcgccggcaatgcttacgacaacgacagcctcaatggcgcgccg
gtgaacccggccgatctcaacggtacggtgctgaccccggcgactccgatcaacggcggc
ccggtgccgacgctggatccggtgacgggcaacgtgacggttccggccggcacgccggcg
ggtaactacacgatcacctaccagatctgcgagaagctcaacccgagcaactgcgatcag
gctacggtgaccgtgccggtaaccgccgcgacgatcaatgcggagaacgacacgccgcct
gccgtcagcggtaccaccggcggcagcgccggcaatgcttacgacaacgacagcctcaat
ggcgcgccggtgaacccggccggcctcaacggtacggtgctgaccccggcgactccgatc
aacggcggcccggtgccggcgctggatccggtgacgggcaacgtgacggttccggccggc
acgccggcgggtaactacacgatcacctaccagatttgcgagaagctcaacccgagcaac
tgcgatgacgctacggtgaccgtgccggtgaccgcgccggtgatcgatgcggtggacgac
ggcttcggcccggttccgggtacgaacggcggcaacgctggtaatgcctacgacaacgac
accctgggcggtgcgccggtcgatccggccgacgtcaacggtacggtgctgaccccggcg
actccgatcaacggcggcccggtgccgaccttggatccggcaacgggcaatgtcacggtg
ccggccggtacgccggcgggtaactacacgatcacctatcagatctgcgagaagctcaac
ccgagcaactgcgaccaggccacggcgaccgtgcccgtgaccgcgccggtgatcgatgcg
gtcgacgacggtttccccccggtgccgggcgcgaacggcggcaacgccggtaatgcctac
gacaacgacaccctgggcggtacgccggtcgatccggccgacgtcaacggtacggtgctg
accccggcgactccgatcaacggcggcccggtgccgaccttggatccggcaacgggcaat
gtcacggtgccggccggtacgccggcgggtaactacacgatcacctaccagatctgcgag
aagctcaacccgagcaactgcgaccaggccacggtgaccgtgccggtgaccgcgccggtg
atcgatgcggtggacgacggcctcggcccggttccgggtacgaacggcggcaacgctggt
aatgcctacggcaacgacaccctgggcggtgcgccggtcgatccggccgacgtcaacggt
acggtgctgaccccggcgactccgatcaacggcggcccggtgccgaccttggatccggca
acgggcaatgtcacggtgccggccggtacgccggcgggtaactacacgatcacctaccag
atctgcgagaagctcaacccgagcaactgcgaccaggccacggtgaccgtgccggtgacc
gcgccggtgatcgatgcggtggatgacgacttcgctcccacgccgggtacgaatggcggc
aacgtcggtaatgcctacaacaacgaccgcttgaacggtgcgcccgtcgatccgaccaac
gtcaccggtaccgtgctgacgccggccacgccgattaacggcggtccggtgccgatgctg
gatccggcaacgggcaacgtaatggtgccgccgggtacgccggcaggtacctacacgatc
acctatcagatctgcgagaagctcaatccgagcaactgcgatcaagctacggtgacggtg
gcggtggccccgccgacgatcgacacggtcgacgacgacttcgctccgacgccaggcacg
attggcggcaccgccggtaatgcctacgacaacgacaagttgaacggtgcgccagtcgat
ccggccagcgtcaccggtaccgtgctgacgccggcgacgccgatcaacggtggcccggtg
ccgaccttggacccggcgacgggcaacgtgatgctgccgccgggtacaccgggtgggact
tacacgatccgttaccagatctgcgagaagctcaacccgagcaactgcgatcaggccacg
gtgacggtggtggtgaccgcgccggtgatcgatgcggtagacgataggtcgccgcagatc
gacggctctgtcggcggcaacgccggtaatgcctacaccagcgataccctcaaccgcgtg
gcggtgaacccggccgacatcgtcggttcggtgatcacgccggctacgtctgcgggtgtc
gtgctcgacccggcgacgggcaacgtgagtgtggctcgcggcacccagggcggtacgtac
acgatccgttaccagatctgcgagaggctcaatccgagcaactgcgatcaggccacggtg
accgtggtggtggtcaatccggcgcagatccgcgtgctcaagaccgctgccgtgcgcacc
ggcaagatcggcgacctgatccgttacaccttgacggtggagaacgtcggcagcgccaac
ctgatcgacggctatatcgtcgacacgccgccggctggtttcagctacgtggcaggttcg
ctgcaagcatccgacgacgacagcctggctgtggtctcgggccagagcccgctgcgcttc
ggcgacatcgacctggcagccggcaagcgcgcgaccctcgtgtacctgatgcggatcggt
tcgggcgttcgtccgggcacccaggtcaacagtgcacaggcgtacgacgatggcggtaag
ccggtgtcgaacatcgccaccgcggagatccagatcgaatccgattcgctgatcgacgac
tcgttggtgttcggtaccgtattcaacgaccgcgaccgcgacggctggcaagacagcgca
gcgctgagcggcgtgcgggtccaaggtggtttcgcgccagaaagctacatcgcaaattcg
accacggtggatcgtggtgcgggcccgcagtccgaaccggatgccagctcgccgatgctg
cacggtgtcgaagtgggcgcgatctcggcccgtcagtccccggccgatccggtcgaggct
caccgggtggtgatccgtcagcgtctgcgcgagctgagcttcaccgacgacttcgtgctg
accagcgctcaaggcgtcacggtgcggatggatgccgccggcaagaccacggtggcgaag
accggcgaagccgccaaggggttgaacgtggccgagccgacggtggagcgtcgtgtggcg
gtggctgaaggcggttacgtggtggattacgtgatcggcaatgcaggtatcgacgagaac
ggtattccgggcgtgcgtatcgcctcggtggaaggtctgctgatcgagaccgaccagttt
ggccgataccacctggcgaacgtgccgggcgggacctgggaacgcggacgcaacttcatc
ctgaaggtcgatccgtcgacgcttccgaccggttcggagttcacgaccgacaacccgctg
ctgcgtcgcatcaccccgggtatcccggtgcgcttcgactggggcgtgaagttgccggag
caggtcatcggtggcggcgaagggcgggtggagctggaactgggcgaagtgttcttcgcc
ccgggcagcgccgaagtgcgcgagcagtacctgcaggtggtcgacacgatggcggccaag
gtgcgcgagtaccgcggcggcgaagtggtgatcaacgccaacggcgaaaacgaaggcctg
gcattcaagcgcgccgatgcgatcaaggcggcactgctcgaacgcttggacaagcaggcg
gcaaaggcattggtcatcagcgttcgcgctgacgtcgataacccgagctcgatggtggta
ggcgtggccgaaggcggcgcgttgctgggtacgttgctgttcgataccgacaagtcggcg
atccgaccggagttcgaaccgcttctcgaccaggtggcggcatcgctggagcggatgggt
ggcggcagcatcgcagtcgtcggtcataccgacctgcgcgcttcgtaccagtacaacgtc
gcgctgggcatgcgccgggcgcaggcggtgtacgaggcgctggccaagcggttaagtccg
caggtgcgcgccaaggtgcgtgtggaagccaacaacaatccggctgcttccgtcggcgca
acgcgataa
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