KEGG   Lysobacter capsici: LC55x_5341
Entry
LC55x_5341        CDS       T04162                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lcp  Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:lcp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lcp02048]
    LC55x_5341 (hsdR)
Enzymes [BR:lcp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LC55x_5341 (hsdR)
Prokaryotic defense system [BR:lcp02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LC55x_5341 (hsdR)
SSDB
Motif
Pfam: EcoR124_C SWI2_SNF2 ResIII HSDR_N DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: ALN88587
UniProt: A0A0S2FYE8
LinkDB
Position
5968164..5971169
AA seq 1001 aa
MTAERQLEEQFIAKLQNLKYEYRGDITDRFRLEKNFREKFEALNRVSLTEGEFKRLLEEI
ITADVFAAARTLRDRNSFTRDDGTPLNYTLVNIKDWCKNSFEVINQLRISTDYSHHRYDV
ILLINGVPVVQIELKSLGISPRRAMEQIVEYKNDPGNGYAKTLLCFLQLFIVSNRTDTWY
FANNNARHFAFNADERFLPIYQFADDANRKITHLDSFAETFLVKCALGQAISRYMVLIAS
EQKLMMMRPYQVYAVKQIVDCIHQNSGNGYIWHTTGSGKTLTSFKASTLLKDNPDIEKCL
FVVDRKDLDRQTREEFNKFQEGCVEENTNTGALVRRLLSEDYADKVIVTTIQKLGLALDE
NSKRNQQRRRNDQLTYKEQLEPLRDKRIVLIFDECHRSQFGENHQAIKAFFPKAQLFGFT
GTPIFEINASRVKVEDQQASYQTTAELFQKQLHAYTITHAIEDGNVLRFHVDYFKPEGKK
PPKSGEAIAKKAVIEAILSKHDAATGQRRFNALLATASINDAIEYHALFKMLQAERQAAD
PDFKPLNIACVFSPPAEGDADVKQIQEGLPQEKEDNAIEPEKKKEALKAILAEYNTRYET
NHSVNEFDLYYQDVQKRIKDQQWPNADHPHAQKIDITIVVDMLLTGFDSKYLNTLYVDKN
LKHHGLIQAFSRTNRVLNGTKPYGNILDFRQQQDAVDSAIALFSGEDAGARAREIWLVDK
APVVIQKLGTAFQKLNDFMKSQGLACAPEAVPNLKGDDARVAFINHFKEVQRLKTQLDQY
TDLTEDNAAAIEQILPEENLLGFRSAYLQTAQRLKTQQGKGGDKPAPDAVDQLDFEFVLF
ASALIDYDYIMGLISRYSQQKPGKQKMSREQLIGLIQSDAKFMNEREDIAAYIATLKAGE
GLSETAIREGYTGFKAEKDANELAAIASKHHLAPAALQGFVDNILQRLIFDGEQLSDLMA
PLELGWKARALAELALMEDLHPLLTKRAQSRDISGLSAYEQ
NT seq 3006 nt   +upstreamnt  +downstreamnt
atgacagccgaacgccaactcgaagagcaattcatcgccaagcttcagaatctcaaatat
gagtatcgcggggacatcactgaccgtttcaggttggagaaaaatttccgcgagaaattt
gaggctctcaaccgtgtaagcctgaccgaaggcgagtttaagcgcctgctcgaagagatc
atcacggccgatgtctttgccgctgcccgcaccctcagagatcgcaacagcttcacccgc
gacgatggcacgccgctgaactacaccctagtcaacatcaaggactggtgtaagaacagc
ttcgaagtcatcaaccagctccgcatcagcacggactatagccaccaccgctacgacgtg
atcctgctcatcaatggcgtgcccgtggtgcaaatcgaactgaaatcgctcggcatcagc
ccccggcgggcgatggagcagatcgtcgaatacaagaacgaccccggcaacggctacgcc
aagacgctgctctgctttctccagctcttcatcgtcagcaaccgcaccgatacgtggtat
ttcgccaacaacaacgcacgccattttgcgttcaacgctgacgagcgttttctgcccatc
taccagttcgcggacgacgcgaacaggaaaataacgcacctggacagtttcgccgagacc
ttcctcgtgaagtgcgcccttggccaggccatcagccgctacatggtgcttatagccagc
gagcagaagctgatgatgatgcgcccgtatcaggtctatgccgtgaaacagatcgtggac
tgcatccaccagaacagtggcaacggctatatctggcacaccaccggcagcggcaagacg
ctcacctccttcaaggcttccacgctgttgaaggacaacccggacatcgagaaatgcttg
ttcgtcgtcgatcgcaaggacctcgatcggcagacccgtgaggaattcaacaaattccag
gaaggctgcgtcgaggagaacaccaataccggcgcgctcgtccggcggctgctctccgag
gattacgccgacaaggtcatcgtcaccactattcagaagcttggcctagcgctggacgaa
aacagtaagcgcaaccagcagcgcaggaggaacgaccagctcacctacaaggaacaactg
gagccgctgcgcgacaagcgcatcgtcttgattttcgacgaatgccaccgctcccagttc
ggcgagaaccaccaggccatcaaagcgttctttcccaaggcccagctcttcggctttacc
ggcacacccatttttgagattaatgcgagccgcgtgaaggtggaggaccagcaggcctca
taccagaccactgcggaactgtttcagaagcaactccacgcctacaccatcacgcacgcc
attgaagacggcaatgtgctgcgcttccatgtcgattatttcaagcctgagggcaaaaag
cccccaaagtccggcgaagcgatcgccaagaaggccgttattgaggcgattctcagcaag
catgacgcagccactggtcagcgccgcttcaatgctttgctcgccaccgccagcatcaat
gacgccatcgagtaccacgcgcttttcaagatgctgcaagcggagaggcaggccgccgac
cccgacttcaagccgctgaacatcgcctgcgtgttttcaccgcccgccgagggtgatgcc
gacgtgaagcagattcaggagggccttccgcaggagaaagaggacaatgccatagagcca
gagaagaagaaggaagccctaaaggccatactcgccgagtacaacacccgctatgaaacc
aaccacagcgtcaatgagttcgatctgtactatcaggacgtccaaaagcgcatcaaagac
cagcagtggcccaatgccgaccacccacatgcacagaagatcgacatcaccatagtggtg
gacatgctgcttaccggctttgattctaaatacctgaacacactctatgtagataagaac
ctcaagcatcacggcttgatccaggccttctcccgtaccaaccgagtgctcaacggcacg
aagccctacggcaacatccttgacttccgccagcaacaggacgccgtggactcggccatc
gcactcttctccggagaggatgccggcgcgcgggcccgcgaaatctggctggtggacaag
gctcccgtggtcatccagaagctcggcaccgctttccagaagttgaacgatttcatgaag
tcccagggcctggcctgcgctccggaggccgtgcccaatctcaagggcgacgacgcccgc
gtcgcattcatcaaccacttcaaagaagtgcagcggctcaagacccagctcgaccaatac
accgacctcaccgaggacaacgccgccgccatcgagcagatcctgcccgaggaaaacctg
cttggattccgcagtgcctatcttcagaccgcgcagcgcctcaaaactcaacagggcaag
ggcggcgataaacccgcgccggatgcggtggaccagctcgactttgagttcgtcctcttc
gcctccgcgcttattgactacgactacatcatgggcctcatctctcgctattcccagcag
aagccgggcaagcagaagatgagccgcgagcagctcattggcctcatccagtccgatgcc
aagttcatgaatgagcgagaggacatcgccgcctacattgccactctcaaagccggcgaa
ggcttgagcgaaactgccatccgggagggctacaccggttttaaggccgaaaaggatgcc
aatgaactcgctgccatcgccagcaagcaccaccttgcacccgccgccctgcaagggttc
gtggacaatattttgcagcgcttgatcttcgacggcgaacagctgagcgatctcatggcc
ccgctggaactcggctggaaagcccgcgccttggccgaactcgccctcatggaagacttg
caccctcttctcaccaagcgcgcgcaaagccgcgacatctcaggacttagcgcatatgag
cagtaa

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