Lucilia cuprina (Australian sheep blowfly): 111676362
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Entry
111676362 CDS
T06013
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcq03000
]
111676362
Transcription factors [BR:
lcq03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111676362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
111676362
NCBI-ProteinID:
XP_023293039
EnsemblRapid:
LOC111676362
LinkDB
All DBs
Position
X:complement(5360657..5445749)
Genome browser
AA seq
678 aa
AA seq
DB search
MLDNPGSFLNKTQFEIMTNLDGNLHHNQEQIECIQQQQENCFQELQHQLNSQLCAVAQHT
SFTTQTTIQQQPTPAATIVPFLPAFLRPPPPPPPSHLAAAASNLPTVLHTHALHASQHNK
MTMQPMWSTAAVAAAHLQAALAVAAVAVNNDSNNTSNVGEQANKITNNNSSITNENGTTL
PHEYGIGSKSVLHSLSSELNFVDVVASTTTPPSTPLYNVNNNNNDNNNNSECPSPAPCSP
DDVIENMQVDTLSMDDDNDLMSSSNGSNSPRSNSNSSAQEDVILTSKEESLDDEDVTEAP
LNLSKPKYSSRSSIDAAINSAILIKRENDRLTPVSNCDSPLHWQSSSSSNADTNFVAIHI
WNNPETQESDTIAPFNNIENISVTRVTRNSRDSTGACAGKRISDQFSPAVHQELKPTSGT
KQAHSPATFLPQDIHSNLRESCSNSRDTSSSHGHGHGYHSKQHIKRPMNAFMVWAKDERR
KILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRT
CIVDGKKMRISEYKVLMRNRRAEMRQLWCRGTGSPGANIPGSARPPCHHSPECEDEVQAA
VTAAYQLQDMGQAVAVAAAAAAVAAGINNMEECNSTLIDRVTPTTSSSNSNYYPAESISE
LEFANESNAIGFESRDDD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgcttgataatccgggatcctttttgaacaagactcagttcgaaatcatgacaaattta
gatggtaatcttcatcacaaccaagaacaaatagagtgcatacaacagcaacaggaaaat
tgtttccaggaattacagcatcagttgaattcccaattatgtgctgtcgcacaacatacc
agtttcacaacccaaactaccatacagcaacaaccaacaccagcagcaacaatagtgcca
tttttacctgcatttttacgtcctcctcccccgccacctccatcacatctagcggcggca
gctagcaaccttcccacagtattgcatacacacgctctccatgcctcgcaacataacaag
atgacaatgcaaccgatgtggtcaacggcagctgtcgcagcagcgcatttacaggccgca
ttggcagtagcggcagttgcagtcaacaatgactccaacaataccagtaacgtaggcgaa
caagcaaataaaattaccaacaacaacagttcaataactaatgagaacgggacaacgttg
cctcatgaatatggcattggaagcaagagcgtgttacatagcctaagttccgaattaaac
tttgttgatgtggtggcaagtacgactacaccgccttccacacctttatataatgtaaat
aacaataataatgataataacaacaatagcgaatgtccttcgccagcgccttgttctcca
gatgatgttatcgaaaacatgcaagtagatacattatccatggatgacgataacgatctt
atgtctagctcaaatggatccaacagcccgagatctaactcaaatagttcagctcaggag
gatgttattttaacgagtaaagaggagtccttggatgatgaggatgttacagaagctccg
ttaaacttgtcaaaaccaaagtattcatcaagatcatcgattgatgcggctattaacagt
gctattttaattaagcgagaaaacgatcgcctgactcctgtctcaaactgtgattctcca
ttgcattggcaatcatcatcgtcttcaaacgccgatacaaattttgttgccatccacatt
tggaataaccctgaaactcaagaatccgatacgatagcaccttttaacaatattgaaaat
atatcggttacaagagttactcgtaatagtcgagattcaacaggtgcatgtgctggaaaa
cgaatttcggaccagtttagcccagctgttcatcaggaacttaagccgactagtggaact
aaacaagcacattcacccgctacgttcttaccacaagatatccattccaatctacgtgaa
agttgcagcaatagccgggacaccagtagcagtcatgggcatggccacggctatcacagc
aagcaacatataaaacgtcctatgaatgcctttatggtttgggctaaggatgagcgtaga
aaaattcttaaagcatgtcccgacatgcataattcgaatatatcgaaaatattgggagct
cgctggaaagccatgtctaatgccgacaaacagccctattacgaagaacaatctcgcctt
tcaaaactccacatggaacaacatccagactacagatatcgacctaggccaaagcgaaca
tgcattgtagatggcaaaaaaatgagaatttctgaatataaagtccttatgcgtaacaga
cgggcagagatgagacaattgtggtgtcgcggaacaggctctccaggtgcaaatattcca
ggttctgcccgaccaccctgtcatcattctcctgaatgcgaagatgaagtgcaggcagca
gtaaccgctgcctatcaactgcaggacatgggtcaagcggtagctgttgcagccgccgca
gctgcagtagcagctggcataaataacatggaagaatgcaactctactttaatagatcgt
gtcactccaactactagcagtagcaatagcaattactatcccgctgaaagtatatcagag
ttggaatttgcaaatgagagtaatgcaattggttttgaatctcgagatgacgactga
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