Lucilia cuprina (Australian sheep blowfly): 111686259
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Entry
111686259 CDS
T06013
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111686259
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111686259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
Ca_bind_SSO6904
DUF5635
TPR_19
Motif
Other DBs
NCBI-GeneID:
111686259
NCBI-ProteinID:
XP_023304376
EnsemblRapid:
LOC111686259
LinkDB
All DBs
Position
5:complement(62873111..62876416)
Genome browser
AA seq
994 aa
AA seq
DB search
MRKMSLFPAYSNEKETKDEEVLPTTSSAAANEEKIWLENNSFAIKTQDLTAIQCKTSLVE
QENSNDFFLSSSSSEEDCSDKNNSLSSNEEIESKRKRVKKSKKKHKKSKNSCNETIEPIL
DFTGQEEFYVDKNKAKQYNTIKTLHKPACPKYRVFYYTLGQSHYNSEKSKTKRYYRFREE
ACEVQQTFYALEENEYTLKLGELNRKTVENCKDLKSWLELIALQDRNPYKWSRLRVAEKK
IDYVQKALIYLPNQEELYKVYISIITQAYTSHDVSKMLEPLLAKDPYSLILWQALIMCTQ
GTMARCNVPDVLLIYERCMKKMFHNHKQSLSAQVSDRIMLELFYNCSLFLRQAGLYEQFF
ALIKLAIELNVAVSSKFLEDLQPRAQDEQTLLEYEEIILQSGLPMNEIWLRIEKLRQSFN
FLPYPGDNDKCSDPQRIVFNEDICHYVYPLKTQENSFKLLLIILKLLKLPFIGSHILASQ
LQGDTDAIEDQLAFYTNPHYICSWDHEEFFSSLFELSKEMVNTPTYISTSIAHEQYAQCL
KSLLLNCAQSYEQIDEIKRLIFLQLWCHFERFLLKLEKLNKKLNEEFIQQARKRFKSLLK
QRQNRNCLQLYVEFALYEYEAESSSEIVENIFKNLLEAYNKEENLQSELAYVYLTYAEIL
LKWGQYEKASKLLSLYALKLDFSQLESITNAKKLMAVTKLKEKLDLTIKVEQNVEIMLLE
QHFMNDYTLSQINIYCVLSYTVQQKQQALEYLQKLLEIFKTQSNQRHAYLREHIYEIYIK
LLQLPKGNSYVSHKLIQQSIFNGLQEYPNNLYLLQKWGCQQSMPWYKLRAGYIKLNPSIK
SVIYIIALARCRFIKTLATASPLELPSFANINNNDLHYHELLVRQRILNLFKILIPNDLT
QNSSSPSLSLYSSLQRNSLFWRCYLSCLSDQNCSFDLSKKCLLTALDECPWSKALYLDGA
TYVPQELSHLQDLIIEKQLRIYALPEELEILRER
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaatgtcgctttttccggcttattccaatgaaaaggaaacaaaagatgaagaa
gttttaccaaccacatcctcagcagcagcaaatgaagaaaaaatctggttggaaaataat
agttttgctataaaaacccaagatttgacagcaatacaatgtaagacatcactagtggaa
caagaaaattccaatgatttctttctcagctccagcagtagcgaagaagattgtagtgat
aaaaacaattcgttgtcttctaacgaagaaatcgaaagtaagcgtaaaagagtaaaaaaa
tctaaaaagaaacataaaaagtcgaagaattcatgtaatgaaactatagaacctattttg
gattttactggccaggaagagttttatgttgataagaataaagcaaaacagtataatact
ataaaaactttacataaaccggcttgtcccaagtatcgcgttttctattacacattaggc
caaagtcattacaatagcgagaaatctaaaacaaaacgttattatcgctttcgcgaagaa
gcttgtgaggtgcaacaaacattctatgctttggaagagaatgaatacacgttaaaactt
ggcgaattgaatcgcaaaacggtggaaaattgtaaagatttaaaaagttggttggagtta
attgctctacaggatagaaacccctacaaatggtctcgtttaagagtggccgagaaaaaa
attgattatgtacaaaaggccttaatatatctgcctaatcaagaggaactgtataaagtg
tatataagtatcataacacaagcttatacttctcatgatgttagcaaaatgttggagcct
ttgctagctaaagatccttacagcttaattttatggcaggctttaataatgtgcactcaa
ggcactatggcacgttgcaatgtacccgatgttttgcttatctatgaaagatgcatgaag
aaaatgtttcataatcataaacaaagcctaagcgcacaagtcagcgataggataatgttg
gaattattctataattgttcattgtttttgagacaagcgggtttatatgaacaattcttt
gctcttattaaattagctatagagttaaatgtagcggtaagctccaagtttttagaagac
ttacagcctcgagcacaagatgagcagacgctgttggaatatgaggagattatcttgcaa
tctggattgcctatgaatgaaatctggctgagaatagagaagctacgacagagtttcaat
ttcctgccctatcctggagacaatgataaatgcagtgatcctcagcgtatagtattcaat
gaagatatttgccattatgtgtatcctttaaagactcaagagaactcttttaaattgtta
ttgataattttgaaattactaaaactacccttcatcggcagccatatattggcctcacaa
cttcaaggtgacactgatgccatagaagatcaattagctttttatacaaatccccattat
atttgctcttgggatcatgaggaatttttctccagcctatttgagttaagcaaagaaatg
gtaaatactcccacttacatcagtaccagtatagctcatgaacagtatgcccagtgtttg
aaaagccttttgcttaattgtgcccaatcttatgaacaaattgacgaaattaaacgattg
attttcctgcaactatggtgtcattttgaacgttttcttttaaaattagaaaaattaaat
aagaaacttaacgaggaatttatacaacaggcgcgcaaacgttttaaaagtttacttaaa
caacgccagaaccgtaattgtctccaactgtatgtggaatttgctttatacgaatatgaa
gctgagtcttcatcggaaattgtagagaatatttttaaaaatcttttagaagcctataat
aaagaagaaaatctacaatctgaattggcatatgtgtatctgacctatgcagaaatttta
ctaaagtggggacaatatgaaaaggcttctaaattactatcattatatgcccttaaacta
gacttttcccagctagagagtataacaaatgctaaaaaacttatggccgtgactaaacta
aaggaaaaattagatctcacaattaaggtagaacaaaatgtggaaataatgcttttggaa
cagcattttatgaatgattatactttaagccaaataaatatttattgtgtactcagctat
acggtgcagcaaaagcaacaagctttagaatatttacaaaaattgttggaaatatttaaa
actcaaagtaatcaacgtcatgcgtatctaagagagcatatttatgagatttatataaag
ttactacaactacccaagggtaatagttatgtttctcacaagctaatacaacaatctatc
tttaatggccttcaagaatatcccaacaatttgtatttattacagaaatggggttgtcaa
cagtccatgccctggtataaactaagagctggttatattaaattaaatccctctattaaa
tcggtaatttatataatagccttggcgcgctgtcgttttattaagacactggctactgct
agcccattagaactgccctcgttcgccaatattaacaataacgatttacattatcatgaa
ctgttagtgcgtcaacgtattttaaatctttttaaaattttaatacccaacgatttaaca
caaaattcctcttccccatcattgagtttatattcctcgctgcaacgcaattccctattt
tggcgttgttatctaagctgtttatccgatcagaattgttcgtttgatttaagtaaaaaa
tgtctgcttaccgccttggatgagtgtccttggagtaaggctttgtatttggatggagct
acatatgtcccacaggagctgtcacatttgcaggatttaataattgaaaaacaattaaga
atctatgctttgcccgaagaattagagattttaagggaacgttaa
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