Lucilia cuprina (Australian sheep blowfly): 111690872
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Entry
111690872 CDS
T06013
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03013
Nucleocytoplasmic transport
lcq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111690872
09122 Translation
03013 Nucleocytoplasmic transport
111690872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111690872
03041 Spliceosome [BR:
lcq03041
]
111690872
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111690872
Spliceosome [BR:
lcq03041
]
Complex C
Other components
EJC/TREX
111690872
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111690872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
111690872
NCBI-ProteinID:
XP_023309220
EnsemblRapid:
LOC111690872
LinkDB
All DBs
Position
4:1006074..1009029
Genome browser
AA seq
705 aa
AA seq
DB search
MSKVLEKTTDFSGLHAAFTEALKKAFEEADVKILRKSYDSFSYNSDHDKKPPMDQAFREL
LIFKMSNDVQLIGKLVKLSVAAVRAEIVSVTIPVVLLGDIFETVTLDKCEKIFNYVEEMV
EVWKEEIFFSSCKNNILRMCNDLLRRLSRAQNTVFCGRILLFLSKFFPFSERSGLNIVSE
FNLENVTDYGVDGKDLDDTLEDIEDIPIKIDYNLYCKFWSLQDFFRNPNQCYSKASWKMF
QTHATTVLESFSSFKLEDTRSNSSQEDSSDDSEKMDLDDIYSNDFKTGIVEVVQKVDNFF
AKFLTNPKLLALQLSDANFRRAVLVQFLILFQYLQLTVKFKSESNTLTPTQTEFIKETET
KVYQLLDETPPNGKRFARTVKHMLTREEMWNNWKNEGCKEFKKPEDSLVEDSQPPAKKER
KTLGDCLKEANAQSKFFLGNDVLTRLWNYSPDNLQACKSEERNFLPQVETYLESSRDKND
TSFEWRALRLLARQSPHFFTFINSPSYKISDYLEAVRKRLTKERLDAAKQAAANANGSNL
ENTPTMSESHEQETVALQEQENDHDGNDEGVLGEEEETNDLDKPEEDNNGHSNLVTASKE
QIEELAPLIGDDWKKLGKKLGYTADELLYFETEHTERDGGCVAMLVNWFADDDDASLDNL
AYTMEGLEINTAAKAVKALIERLSNKVPSFKDDGDDVDIKMETTD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagttttagaaaagactactgatttctctggattgcatgctgcatttacggaa
gctttaaagaaggcctttgaagaagctgatgttaagattttaagaaaatcatatgatagt
ttctcgtacaactctgatcatgacaagaagccacctatggatcaagcttttagagaacta
ttgatattcaaaatgagcaatgacgttcagttgattggaaaattggtgaagctttctgta
gccgctgtaagggctgaaattgtgtctgtaacaattccggtggtattattgggtgacatt
tttgaaacagtcacgttggacaaatgtgagaaaatctttaattacgttgaagaaatggtt
gaggtgtggaaagaggaaatatttttttcctcttgtaagaacaacatattgcgaatgtgc
aatgacctattgagacgacttagtcgtgctcagaacacggtgttctgcggacgaatttta
ttatttttgtcgaaattcttcccattttccgaaagatctggtctgaatattgtttctgaa
tttaatttggaaaatgtaacagattatggtgtagatggaaaagatttagacgacacattg
gaggacattgaggatattcctatcaaaatagattacaatttgtattgtaaattttggtct
cttcaggattttttccgcaatccaaaccagtgctacagcaaagcgtcttggaaaatgttt
caaactcatgctaccacagtcctggaatctttttccagcttcaaacttgaagatactcgg
tccaattcctcacaagaagatagcagcgatgatagtgagaaaatggacttggatgatata
tatagtaatgatttcaaaactggtatcgtcgaagttgtccaaaaagtcgacaatttcttt
gctaaatttttaacaaatccaaaactattggccttacaactttctgatgcaaatttccga
cgtgcggttttagtacagtttctaattctatttcagtatttgcagcttacagtaaaattt
aaatcggaatcaaatactttaacccctacacaaacggaatttatcaaagaaacggaaacc
aaagtgtatcagctgttggatgaaacacctcccaatggtaaacgttttgcacgcactgtt
aaacatatgttgactcgtgaggagatgtggaacaattggaaaaatgaaggatgtaaagaa
tttaaaaaaccagaagactctttagtggaagacagccaaccaccggctaaaaaggaacga
aaaacgttgggtgattgcttgaaagaggccaacgcacaatcaaagtttttcctgggcaat
gatgtcttaacacgtctgtggaactactcacctgataatttgcaagcatgtaaaagtgaa
gaacgaaactttcttcctcaagttgaaacatatttagagagttcacgagataaaaatgac
acatctttcgaatggcgtgctctacgcttgcttgcacgacaatcgccgcacttttttaca
ttcatcaattcgccatcctataaaatttctgactacttagaagcagtccgaaaacgctta
actaaggaacgattagatgctgctaaacaagccgcagctaatgctaatggttcgaaccta
gagaatacaccaacgatgtcggaatcacatgaacaagaaaccgttgccttacaggaacag
gaaaacgatcacgatggaaacgatgaaggtgttctgggagaggaggaagaaacaaatgat
ttggacaagccagaagaggacaacaacggacattccaatttagttacagcatcgaaagaa
caaatagaggaattagcaccattaattggtgacgattggaaaaaattgggcaaaaaattg
ggttatacagctgacgagctcttatatttcgaaacagaacacactgaacgagatggtggc
tgtgtagctatgcttgttaattggtttgctgatgatgacgatgcaagtctagacaattta
gcatacaccatggagggtctcgaaataaatactgctgctaaagctgtaaaagcactaatt
gaacgtttatctaataaggtaccttcttttaaagacgacggagatgacgtggacattaaa
atggaaacaacagattaa
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