Lactobacillus crispatus: LCRIS_01734
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Entry
LCRIS_01734 CDS
T01222
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lcr
Lactobacillus crispatus
Pathway
lcr00521
Streptomycin biosynthesis
lcr00523
Polyketide sugar unit biosynthesis
lcr00541
O-Antigen nucleotide sugar biosynthesis
lcr01100
Metabolic pathways
lcr01110
Biosynthesis of secondary metabolites
lcr01250
Biosynthesis of nucleotide sugars
Module
lcr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LCRIS_01734 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LCRIS_01734 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LCRIS_01734 (rfbC)
Enzymes [BR:
lcr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LCRIS_01734 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CBL51181
UniProt:
D5GZH2
LinkDB
All DBs
Position
complement(1763756..1764364)
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AA seq
202 aa
AA seq
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MGQIKVEKNVGGIEGLAVITPTVHGDDRGYFMETFNQRDMMDAGFSINFVQDNQSSSTKG
VLRGLHFQKHYPQIKLVRAVRGSVFDVAVDLRSESKTYGKWYGVELTAENKKQFLIPQGF
AHGFLVLSDVAEFCYKVNDFWHPNDEGGMAWNDPEIGIKWPHVKGDYPGSADASGYTLDD
GTKLNLVERDQEWKGLKDTFKF
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaattaaagtagaaaaaaatgtcggtggtattgaaggtttagcagtaattacc
ccaactgttcacggtgatgaccgtggttactttatggaaacttttaaccaaagagacatg
atggatgctggttttagcattaacttcgtacaagataaccaatcaagttcaaccaagggt
gtattgcgtggtttacactttcaaaagcattatccacaaattaagttggttcgtgctgtt
cgcggtagcgtttttgatgttgctgttgaccttcgtagtgaatcaaaaacttatggtaag
tggtacggcgttgaattgaccgctgaaaacaagaagcaattcttgattccacaaggtttt
gcacatggctttttggtattaagcgatgtagctgaattttgttacaaggttaatgatttt
tggcaccctaatgatgaaggcggtatggcttggaacgatcctgaaattggtatcaagtgg
ccacacgttaagggcgactacccaggcagcgcagatgctagcggctacactttggacgac
ggcactaagctaaacttagtagaacgtgaccaagaatggaaaggtttgaaagataccttt
aagttttaa
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