KEGG   Loigolactobacillus coryniformis subsp. torquens: LC20004_00780
Entry
LC20004_00780     CDS       T05341                                 
Name
(GenBank) hypothetical protein
  KO
K15342  CRISP-associated protein Cas1
Organism
lcy  Loigolactobacillus coryniformis subsp. torquens
Brite
KEGG Orthology (KO) [BR:lcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcy03400]
    LC20004_00780
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lcy02048]
    LC20004_00780
DNA repair and recombination proteins [BR:lcy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     LC20004_00780
Prokaryotic defense system [BR:lcy02048]
 CRISPR-Cas system
  Universal Cas proteins
   LC20004_00780
SSDB
Motif
Pfam: Cas_Cas1
Other DBs
NCBI-ProteinID: ATO42539
UniProt: A0A2D1KK76
LinkDB
Position
174932..175834
AA seq 300 aa
MAFRNLYIQNPARLSISRSQLVIQQEERYTVPVEDISSIMIEHKQCTITAPTLSFLAEHQ
VAVFTCDQKHLPCAVVLPLGQYYRKLEALEAQLHVRTKTKARLWQKLMKQKIENQAKVLE
LNHCKNVAELNFLATQVTEGDKTFKESRAARLYFMGLFGDQFNRRNENPMNGALNYGYAI
IRGIIARDICAYGFEPALGVFHKNELNPFNLADDLIEPFRAYVDLWAYEHQTDLKAGLTP
TNKQALFQLLFTEVRIDGEFHSLSNAVHKLVSSYTTCCRNNSAAGLKLPELIPLVAHEYE
NT seq 903 nt   +upstreamnt  +downstreamnt
atggcatttcgtaatctatatattcaaaacccagcgcgtttgagtatttcaagaagccag
ttggtgattcaacaagaagagcgttataccgttcctgttgaggatatttctagcattatg
atcgagcataagcaatgcacaattacagcacccacgctatcttttttagcggaacatcaa
gtagcggtatttacgtgtgatcagaaacacttaccttgtgcggtagttttaccgctaggt
caatattatcgtaagctggaggcgttggaagcacaattacatgtacggactaaaacgaaa
gcgcgcttgtggcaaaaattaatgaaacaaaaaattgagaatcaagctaaggttttagag
ttgaatcactgtaaaaacgtcgctgaactgaatttcttagcgactcaagttactgaaggt
gataaaacatttaaagaatcgcgcgctgcacgactatattttatgggattgtttggtgat
caatttaatcggcgtaacgaaaatcctatgaacggtgctttgaattatggttacgcaatt
atccgtggtattattgcccgtgacatttgtgcatatggttttgaaccagcattaggtgtt
tttcataaaaatgagttaaatccatttaatttggcagatgatttaattgaaccatttcgt
gcttatgtagatttatgggcttatgaacatcaaactgatttgaaggccggtttaacaccg
accaacaaacaagcgttatttcagttactctttacagaagttcgaattgatggggaattt
cattctttgagcaatgcagttcataaattagtatcgtcgtacacaacttgttgtcgtaat
aattctgccgcgggtttaaagttaccggaactgatcccgctggtggcgcacgaatatgag
tag

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