Leptinotarsa decemlineata (Colorado potato beetle): 111517919
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Entry
111517919 CDS
T07512
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111517919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldc03400
]
111517919
Enzymes [BR:
ldc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
111517919
DNA repair and recombination proteins [BR:
ldc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
111517919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
BRCT_2
BRCT
mRNA_cap_enzyme
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
111517919
NCBI-ProteinID:
XP_023029983
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MNFLDLCSFFEEIKITKGPREKYTLIQNRFKTMREGLCHNPGAFFNVLRLILPDLDRERE
SYKMKEAKVARTLIKMLDLPPGNDRNVLNKSYLVAAQTTDFGEVVYSVIRKYLSNTKTSL
TVLEVNQSLDLLTKRKNESEAETIMMNLFKKVSPEDIRWIIRIILKNLKLGISSNQILNC
YHKDGASFYASNSNLRKVCHILANQNVRLHELDIELFEAFRPMLSKRIDGVNFKRELPDN
KLFYVENKFDGERFQLHLRDNEFKYFSRNGFDFTENLGKSYETGIFTPHLKGLFDKNIKN
AILDGELMVWNKKTKQFGSKGMALDVKKLRQDNLHQPCFVVYDIILLNNRVLTNVPFRER
IEILKTVFCNVKIGTIVLSKVKQVHSRQEIIDELNQAVDNEEEGIILKDPDSVYKYSDRN
SGWFKLKLEYFQDVMNDMDLILMGADRSSYASDSFRSFFVGIRSGNASNGKPLYLCIGKV
TTGLNMEEVENLAKKIKLQGKKFENFNSENLKFGKETPDYYIDPENSLVFEVRATELIRN
TDNAYKTGYTLRFPRILKIREDKPVDECMSINELLELTKNNKSVIKLNKRNIELEEILKT
KTKKVKQKDIVMPTIHDSKKVSDILDGYNIFVMNDSPEMDKEKAESIIKKAGGTVSYRVK
ENVDIVLAGDRSEKIRQLIQKRPKYDIINLAWLNRVIEDGNILGYDQKEVYYIGYNYKNC
LSDELDKYGDSFTIETDDDKLKKTFQTISDMGEFSSLGTTVRLHRRKYFNEYFAYFDKFS
IPDDQNSEIIYDCFIDQLEFQYYGGNVCEKIYENVNLIVYNGQSDRKIFLENYIKSLNNT
RIGIKTKTFIYE
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcctagatttatgtagcttttttgaggaaatcaagataactaaaggccccaga
gagaaatacactctgattcagaacaggttcaaaacaatgcgagagggtttgtgtcacaat
ccgggggcttttttcaatgtactaagacttattttaccagatctagatcgagagagagaa
tcttataaaatgaaggaagccaaggtggctagaaccttaatcaaaatgttagatttacca
ccgggtaatgaccgaaatgtacttaacaagtcttatttagtggctgcacaaacaactgat
tttggagaagttgtatattcagttatcagaaaatatttatctaataccaagactagttta
actgtactagaggtgaaccagtcactggatcttttgacaaagagaaaaaatgaatctgaa
gcagaaacaatcatgatgaatctattcaaaaaagtatctccagaagatattcgatggatc
ataagaattattttaaagaatctgaaacttggtataagttccaaccaaatcctcaattgt
tatcataaagatggggcatcgttttatgcttcaaatagcaatctaagaaaagtgtgccat
attttagcaaatcaaaatgttaggttacatgaattggatatcgaattgtttgaagctttt
cgtccaatgttatcgaaacgaattgatggtgtaaacttcaaaagagaactaccagataat
aaattattttatgttgaaaataaattcgatggggaaagatttcaactacatttaagagat
aatgaattcaaatatttttcaagaaatggtttcgacttcactgaaaatttaggaaaatct
tatgaaactggtatatttaccccacacctgaaaggtctttttgataaaaatattaagaat
gctattctcgatggtgaattgatggtatggaacaagaaaactaagcagtttggatcaaaa
ggtatggctctggatgtgaaaaaattacgtcaagacaatcttcatcaaccttgcttcgtt
gtatacgatataattctcctgaataacagagttctcacaaatgtccctttcagggaacga
attgaaatattgaagaccgtgttttgtaatgtaaaaataggcacaatagtcctgagcaaa
gtgaagcaggttcattcaaggcaagaaataatagatgaattgaaccaggctgttgataat
gaagaggaaggaatcattttaaaagatcctgattctgtgtataagtatagtgacagaaat
agtgggtggttcaagctaaaactggagtattttcaggatgtaatgaacgacatggacctc
attctgatgggtgctgatcgatcgtcttacgcatctgatagtttcagatctttttttgtt
ggaattagatcaggtaatgccagtaatggaaaacccctctacttatgtataggaaaggta
acaactggtctgaacatggaggaagttgaaaatcttgcaaaaaaaatcaaactgcaaggg
aagaaatttgaaaatttcaactctgaaaacctgaaatttggcaaagaaactccagactac
tacatcgacccagaaaattctttagtattcgaagtgagagcaacagagctgattcgtaat
accgataatgcttacaaaactggttatactttacgctttccaagaatcctcaaaatacgt
gaggacaaaccagttgacgaatgcatgtcgatcaatgaattattagaactcacaaaaaat
aacaagtccgtcatcaaactcaacaaacgcaacatagagttggaggaaatactgaaaacc
aagacgaaaaaagttaaacagaaggatatagttatgccaaccattcatgactctaagaaa
gtatctgacatattggacggatataatatttttgtaatgaatgatagcccggaaatggat
aaggaaaaagctgagagtataataaagaaagccggagggacagtgtcatatagagtgaaa
gagaatgttgatatagtcctggcaggtgatagatcagaaaaaatcaggcaactaattcag
aaaagacccaaatatgacatcataaatttagcatggctgaatagggttatagaagatggc
aatattctaggctacgatcaaaaggaagtttattatataggttacaattacaagaactgt
ttatcagatgaattggacaaatatggtgacagttttactatagaaactgatgatgacaaa
ctgaaaaaaacttttcaaaccatttcagacatgggagaattttcaagcctaggcacaaca
gtgagacttcataggagaaagtatttcaacgaatattttgcttactttgacaagttctcc
attcctgatgatcaaaattctgaaataatttatgattgttttattgaccagctcgagttc
caatattacgggggaaatgtctgcgaaaaaatttatgaaaatgtgaatctgatagtgtat
aatggccaaagtgacagaaaaatattcttggagaattatattaaatctttgaataataca
agaattgggatcaagactaaaactttcatttatgagtaa
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