Leptosomus discolor (cuckoo roller): 104339707
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Entry
104339707 CDS
T08399
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104339707 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldi03400
]
104339707 (LIG4)
Enzymes [BR:
ldi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
104339707 (LIG4)
DNA repair and recombination proteins [BR:
ldi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
104339707 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
DUF2948
SKA1
Motif
Other DBs
NCBI-GeneID:
104339707
NCBI-ProteinID:
XP_009944611
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MASSSASQPPSKKTVASHVPFADLCSTLERIQTCKSRPEKTKYFKDFLDSWRKFHDALHQ
KEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLHYRAP
AGSRGDAGDFAMIAYFVLKPRSPKRGRLTIEQVNEHLDAIANNNAAKNKGLLKKSLLQLI
TQSTALEQKWLIRMIIKDLKLGISQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVSL
SDVSITLFSAFKPMLAAIADVQQIEKQMNHQIFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASPLDGSLTPFIHQVFKSNIQNCILDGEMMAYNPETQTFMQKGNRFDIKRMV
EDSELQTCFCVFDVLMVNDQKLGHEVLSKRYEILSSVFTPVTGRIHVVGKKNAKTRKEVV
DALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVSGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAVAETPPPNEKPTVFHSVCRVGSGYTMKELYDLGLKLAKHWKPYHRKDPP
CNILCGTEKPEMYIEPCNSVIVQIKAAEIVNSDMYKTDCTLRFPRIEKIREDKEWYECMT
SDMLEGLRSKAEGKLASKHLHIEEYDEPQEKKRKTVSKAKKIIGIAEQFKAPDLSSVNRV
SNVFEDVEFCVMTGTGQYPKSELESRIAECGGSVVQNPGPETYCVIVGAENVRVKNIIAS
NKYDVVKAEWLLQCFQTKMLVPWQPAFMIHMSPDTKEHFAREYDCYGDSYTADTDVAQLK
EVFSRVKDNQAMPLDVIAELEERYLWNSCQLSIFRGNTVYVDCYAVVNEPRTKIHGTMLS
IRALELRFYGAKVVSRLEEGVSHVVIGEDHSRVKEIKALRRTFGKKFKIVSELWVTHSVE
EGVPKNENQYLL
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcatctgcttcccagcctccctctaaaaaaacagtggcctctcacgtgcct
tttgcagatctgtgttctactctggagcgaatacagacgtgtaaatctcgtccggagaaa
accaagtatttcaaggattttctggattcctggagaaaattccatgatgctcttcatcaa
aaagagaaagacgtcaccgactctttttatccagctatgcgacttattctcccacagttg
gaacgagaaaggatggcctatggaattaaagaaactatgctcgcgaagctctatatcgaa
ctgcttaatttaccgaaagacggcaaagatgctgcgaagcttttacattacagggcacct
gctggctcacgtggagatgccggcgattttgcaatgatcgcctactttgtgttaaaacct
cggagcccgaaacgaggcagactgacgatcgaacaagtcaatgagcacttggatgcgata
gctaataataacgctgctaaaaacaagggtctgctaaagaaaagtctccttcagttaatt
acccagagtacagcactggaacaaaaatggctcatccggatgattataaaggatctgaag
ctcggcattagtcaacagactatattttccatttttcaccccgatgctgctgaattgcac
aatgtcacaactgatttggaaaaagtttgcagacaactgcacgatccctctgtctcgctt
agcgatgtttctatcaccttgttttctgcctttaagccgatgcttgctgctattgctgat
gtccagcagattgagaaacagatgaatcaccagatattctacatagaaacgaagctggat
ggtgaacgtatgcagatgcacaaagacggagatgtctataaatatttttcccgaaatggg
tttgactatactcagcagtttggtgcttccccccttgatggttcattaacgccatttatt
catcaggtatttaagagcaatatacaaaactgcatccttgatggtgagatgatggcttac
aaccctgagacgcaaacctttatgcaaaaaggaaacagatttgacataaaaagaatggtg
gaggactctgagctgcagacctgcttctgtgtgttcgatgtattgatggttaatgaccag
aagctggggcacgaagtcctaagcaaaagatacgaaatcttaagtagcgtatttaccccg
gtaacgggcaggatacatgttgtaggtaaaaaaaatgccaaaacaagaaaagaagtagtt
gatgctttaaatgaagccatagataacagagaggaagggattatggtgaaagatcccatg
tccacttacaagcctgacaaacgtggggaaggctggttaaaaatcaagccagaatacgtc
agtgggctgatggatgaactggaccttttaattgttggtggttactgggggaagggctca
cgtggcggaatgatgtctcattttctgtgcgctgttgcggagacgccccctccgaatgaa
aaacctactgtcttccactctgtctgtcgtgttggctctggctatacgatgaaagaattg
tatgatctaggtttgaagctggcaaaacactggaagccctaccataggaaggaccctccc
tgtaacatcttgtgtggaactgaaaagcccgaaatgtacatcgaaccttgcaactctgtc
atagtccagatcaaggcagccgagatcgttaacagtgatatgtacaaaactgactgtact
ttgagattcccccgaattgagaagataagagaggacaaagaatggtacgagtgcatgact
tcagacatgctagaaggtctcagaagcaaagcagaagggaagctggcatctaagcacctc
catatagaggagtatgatgagcctcaagagaaaaaaaggaaaactgtatcgaaggcgaag
aagatcattggaatagctgagcaatttaaagctcccgatctttctagtgtgaacagggtt
tcaaatgtatttgaggatgtggaattttgtgttatgacaggaacaggacaatacccaaag
tcggagctggaaagcagaatagctgaatgtggtggcagcgtggtgcagaacccggggccg
gagacttactgtgtcattgtaggagctgagaacgtcagagtgaaaaacatcatcgcttcc
aacaaatacgatgtggtgaaggcggagtggctccttcagtgttttcagaccaaaatgctg
gtgccttggcagccagcttttatgattcacatgtctcctgacacaaaagaacattttgct
cgtgagtatgattgttatggagacagctacacagcagacacggatgttgcccaactcaag
gaagtgttctcaagggtgaaagacaatcaggcgatgcctttggacgttattgcagagttg
gaagaacgttatttatggaacagctgtcagctcagcatattcagaggaaacactgtttac
gtggactgttatgctgttgttaatgagcccagaaccaaaatccatgggacaatgctctca
atcagagctttggagctccgtttttatggtgcaaaagtagtctctcgcctcgaagagggt
gtctcccatgttgttataggagaagatcattcccgggtaaaagagataaaagcactaagg
agaacatttgggaaaaaatttaaaatcgtatctgagctgtgggtaacacactctgtagag
gaaggagtcccaaagaatgaaaatcagtacttactttaa
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