Leptosomus discolor (cuckoo roller): 104340300
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Entry
104340300 CDS
T08399
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ldi03009
]
104340300 (DDX55)
Enzymes [BR:
ldi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104340300 (DDX55)
Ribosome biogenesis [BR:
ldi03009
]
Eukaryotic type
Pre-60S particles
Helicases
104340300 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
AAA_22
SHOCT
SurA_N_3
Motif
Other DBs
NCBI-GeneID:
104340300
NCBI-ProteinID:
XP_009957555
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MNNKDVAAEAVTGSGKTLAFVIPLLEILLRREEKLKKMQVGAIIITPTRELAIQIDEVLS
HFTKHFPRFSQILLIGGRNPMEDVEKFKELGGNIIVATPGRLEDLFRRKADGLDLASCVK
SLDVLVLDEADRLLDMGFEASLNAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRI
SVKEKGVAASNTQKTPTRLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYY
GKALESLIKQVKIMSIHGKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVVQY
DPPSSASAFVHRCGRTARIGNVGSALVFLLPMEESYVNFLSINQKCPMQEMKPQTNVVDL
LPKLQSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRIKDLDFASLAKGFALLKMPKM
PELRGKCFPDFTPVTVNTDSISFKDKNREKQRQKQLEQQRKERQENGGKKKFTKNKAWSK
QKAKREKKKKITAKRKREEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKRLTGSQN
RLKVETVADLESEG
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaaggatgttgctgcagaagcggtaacaggcagcggcaaaaccttagccttt
gtgattcctcttctggaaattcttctcagacgggaagaaaagttaaagaaaatgcaggtt
ggagctataattatcacaccaacaagagaattagctattcaaattgatgaggtactatca
cacttcacaaaacacttccccaggtttagtcagattcttttaattggtggcaggaacccc
atggaagatgttgagaagtttaaagaacttggtgggaacatcattgtagctacaccgggt
cgcctggaggatctgttcaggagaaaagcagatgggctggatctagcaagctgtgtgaag
tctcttgatgtgttggtattagacgaagcagacagactgctagatatgggctttgaagca
agtttaaatgccatcctggactttttgcccaagcagagacggacaggtctgttctcagcc
actcaaactcaagaggtggagaacctggtgagagcaggtctccggaatcctgtccgcatc
tcggtgaaagagaagggagtggcagccagcaacacccagaaaactccaacacgcctggag
aactactatatgatctgcaaagcagatgaaaaatttaatcagttggtgcattttcttcga
cagcacaaacaggaaaaacatctagtctttttcagcacgtgtgcctgtgtggaatactat
gggaaggctttggaatccttaattaaacaagtgaaaataatgagcattcatgggaaaatg
aaacacaagcgtaacaagatttttactgagtttcggaagctcccaggtggcattttagtt
tgcaccgatgtgatggcccgtggcatcgacattccagaagtacactgggttgtgcagtat
gacccacctagcagtgcaagtgccttcgtgcatcggtgcgggcgaacggcgcggatcggc
aacgtgggcagtgcgcttgtgtttttgcttcccatggaagaatcttacgttaacttcctc
tcaatcaaccaaaagtgtcccatgcaggaaatgaaaccacagacaaatgtggtagatctt
cttccaaaactgcaatctatggccctagctgacagggcagtgttcgagaaagggatgaaa
gcattcgtgtcttatgtccaggcttatgccaaacacgaatgtaatctcatcttccgaata
aaagatctggattttgctagccttgccaaaggttttgcattgttaaaaatgccaaagatg
cctgaactaagaggaaaatgttttccagactttactccagtcactgttaatacagactcc
atttcatttaaggataaaaatagagaaaaacagagacaaaagcaactagaacaacaaaga
aaagaaagacaggaaaatggagggaaaaagaaattcacaaagaacaaagcctggtcaaag
cagaaagccaagagggagaagaaaaagaaaataacagctaaaaggaagcgtgaagagggc
tctgatattgaagatgaggatatggaagagttgctgaatgacacaagactcttgaaaaga
ttaaaaaagggaaaaattagtgaagaagagtttgagaagagactaacaggcagccagaat
agacttaaagtagaaactgttgctgacttagagtctgaaggctga
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