Leishmania donovani: LDBPK_080080
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Entry
LDBPK_080080 CDS
T02289
Name
(RefSeq) ATP-dependent DEAD/H RNA helicase, putative
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ldo
Leishmania donovani
Pathway
ldo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LDBPK_080080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldo03041
]
LDBPK_080080
Enzymes [BR:
ldo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LDBPK_080080
Spliceosome [BR:
ldo03041
]
Complex A
U2 snRNP components
U2 related factors
LDBPK_080080
Complex B
LDBPK_080080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
13391906
NCBI-ProteinID:
XP_003858573
UniProt:
E9B9M8
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All DBs
Position
8:20033..22090
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AA seq
685 aa
AA seq
DB search
MNYASIRTDFYVVPPDMTNLTAQEMRELLRELDGAKVHGKDVPRPIRSWHGTGLPDRVLE
VLEEHEYKCPFAVQSLGVPALMSGRDLLLTAKTGSGKTLCYALPLIRHCADQPRCEKGEG
PIGLVLVPTQELAMQVFTLLDELGEAAGLRCVASYGSTSLSDNIRHAKAGCELMVATPGR
LLDLLTVNGGKTLSLSRVSFVIVDEADRLFDSGFMEHVEAFLKNIRPDRVTGMISATMPK
ELRGVVAQHLRNPVVISVGGKPTPASNVEQQFFFFDEEVYDANNIKADMSPRLVKLLALL
GDEGGDGQNLILVFTQRKEEVDELLGRLTTLGYANRVATLYSGMDPIDREFALEHFVPGK
QFILVATAVAERGLDIPYLGLVINYRLPNHYEAYVHRIGRTGRAGRSGRAVSFFTRGKDD
DIAPELVEGLERAEQRVPEELYEVAEKVRALRKSGDARYNSGFFRGYRDAKAQRFTDRDK
KEKMREAARAAGLEQFLSSSSESDSDASSDEDANITAVPVQSRARAASAEEAAASSMALT
LHRGAQSGALTLSAAQEDRISKALAFAQKTTTAATMAADEATMVRFQSEYPINDLPDAVR
GKLQSGAFMRSIAEETETSLIRKGVYFDPRYKHSRRMKEGEKPLYFLIVGKSMEAVRAAR
NKLDEVKAELLSKQKKTGSVTGATI
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgcctccattcgcacagacttctacgtggtgccgccggacatgacgaatctc
acagcgcaggagatgcgagaactgctgcgagagctggatggggcaaaggttcacgggaaa
gatgtgccgcggccgattcgctcctggcatggcaccggattgccggatcgcgtgttggag
gtgctggaggagcacgagtacaagtgcccttttgcggtgcagtcgctcggcgtgccggcg
ctgatgagcggacgggatttgctcctcacagcaaagacggggtccggcaaaacgctctgc
tatgcgctgccgctcatccggcactgcgcggaccagccgcggtgtgaaaagggcgagggc
cctatagggctggtgcttgtgcccacgcaggagctcgctatgcaggtgttcacgcttctc
gacgagttgggggaggctgctgggctgcgctgtgtcgcctcgtatggcagcacgtcgcta
tccgacaatattcgccatgccaaggcggggtgtgagttgatggtggcgacgcccggccgg
ctgctagaccttctcacagtgaatggagggaagacgttgagcctgtcgcgcgtctccttc
gtcattgttgacgaggcggaccgcctcttcgacagcggcttcatggagcacgtggaggcc
tttctgaagaacatacgccctgaccgcgtaacagggatgatcagcgctacgatgccaaag
gagctgcgcggggtagtagcgcaacacctgcggaaccctgttgtcatttccgtcggcgga
aaaccgacgcctgcctcgaacgtcgagcagcagttcttctttttcgacgaggaggtatac
gacgcgaacaacatcaaggcagacatgagcccacgtcttgtaaagttactggcattgctg
ggagacgagggcggtgacggtcagaacctaatcctggtctttactcaacggaaggaggag
gtagacgagttgctggggcggctcaccacgctgggctacgccaaccgcgtggcaacactc
tacagcggcatggaccccatcgaccgcgagttcgcgctggagcactttgttccaggcaag
cagtttattctcgtcgccaccgcagttgcagagcgcggcttggatattccctacctcggc
cttgtgatcaactaccggttgcccaaccactacgaggcgtacgtgcatcgtatcggccgc
accggccgcgccgggcgcagcgggcgtgccgtgagctttttcactcgtggcaaggatgac
gacatcgctccagagctggtggaagggctggagcgtgcggagcagcgagtaccagaggag
ttgtacgaagttgcggagaaggtgcgtgcgctgcgcaagtctggcgatgcacggtacaac
agcggcttctttcgcggctaccgcgacgcgaaggcgcagcgcttcactgaccgtgacaag
aaggagaagatgcgcgaggctgcccgcgcggccgggttagagcagtttctcagctcctcc
tccgagtccgactcggatgcctcgagcgacgaagatgcaaacatcactgcggtgccggtg
caatcgagagctcgcgccgcgtcggcagaagaggcagcggcgagctcgatggcgctgacg
ctgcaccgtggtgcgcaaagcggcgcgttgacgttgtccgctgcgcaggaggaccgcatt
tccaaggcgctggcgttcgcgcagaaaacaaccacggcggcaacgatggcggcggacgag
gcgacgatggtgcgctttcagagtgagtaccccatcaatgacttgcccgatgccgtgcgt
ggcaagctgcagagcggcgcttttatgcgctccatcgcggaggagacggaaacatcattg
atccgaaagggcgtgtatttcgacccacgctacaagcactcgcggcggatgaaggagggg
gagaagccgctgtattttctgatagtgggaaagtcgatggaggcggtgcgggcagctcgc
aacaaactcgacgaggtgaaggcagagctgctgagcaaacagaagaagacgggatccgtg
actggtgccacgatctag
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