Leishmania donovani: LDBPK_241410
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Entry
LDBPK_241410 CDS
T02289
Name
(RefSeq) histone deacetylase, putative
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ldo
Leishmania donovani
Pathway
ldo03082
ATP-dependent chromatin remodeling
ldo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
LDBPK_241410
03083 Polycomb repressive complex
LDBPK_241410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ldo03036
]
LDBPK_241410
Enzymes [BR:
ldo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
LDBPK_241410
Chromosome and associated proteins [BR:
ldo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
LDBPK_241410
HDAC complexes
Sin3A-HDAC complex
LDBPK_241410
BRAF-HDAC complex
LDBPK_241410
REST complex
LDBPK_241410
SHIP complex
LDBPK_241410
MiDAC complex
LDBPK_241410
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
LDBPK_241410
Heterochromatin formation proteins
Other heterochromatin formation proteins
LDBPK_241410
Chromatin remodeling factors
NuRD complex
LDBPK_241410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
13391154
NCBI-ProteinID:
XP_003861232
UniProt:
A0A3Q8IC47
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All DBs
Position
24:506362..507972
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AA seq
536 aa
AA seq
DB search
MSTPEQLPALSAAGSPSSGGASSHHSPHEASLSFPASVIPGDASAESPRAWSMPRSSTAS
EESAATSQLQQKPDAPESRLGGRKVVYFVDHSVTSIAYAEGHLMRPSRVRALHALVHSLG
LDNAECMTVCHARPATAEEMGAFHRSAYLECLRQAPVICGNPLDEMSLAFQKEFDVPFAS
QNGDCPLFPEVWALVSSQAGASLACAEALVRGDATVAMNWAGGMHHAAAAHASGFCFVND
IVLCIRRLLRHYQRVLYVDLDVHHGDGVEGAFYGNHRVMTLSLHQFGNGFFPGTGDYPTR
ETADSFAINVPLPTRTGDAAYLLSFRTALSSVVQCFDPEAMVVQCGADTIAGDLIGRLCV
TTLAHTQCVADVLSLERPTVLLGGGGYHVFHTARCWAIHTATALGRTAAQLPLYIPRTDP
YYMDYRRECTPKRPTLHVFLDPDVDDPLPLGDSLAFWRQLCRSIQWQMRAARLVRQGFFR
TLQLCRQRRAALLRRFATQEAGRESGIGVSGSKRPRSANATDRDAKEGVEDRVVSA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactccggagcagcttcccgcgctctcagcggcgggctcaccgtcgtcgggaggg
gcttcctctcatcactcaccgcacgaagcatcgctctcgtttcccgcttcggtgattcct
ggcgacgcctctgcggagtctccgcgcgcttggtcgatgccgcggtcttcaacggcgagc
gaggaaagcgcagcaacatcgcaactgcagcaaaagccagatgcaccggagtcacgcctt
ggggggcggaaagtggtgtactttgtggatcactccgtcacttccatagcctatgcagag
ggtcatttgatgcgaccgtctcgtgtgcgtgcgctgcacgcgcttgttcattccctgggc
ctcgacaatgcagaatgcatgactgtatgtcatgctcgtccggcgacggcggaggaaatg
ggggcgtttcaccgcagcgcgtacttggaatgtctgcggcaggcaccggtcatttgcgga
aatccgctggacgagatgtccttagcttttcagaaggaattcgacgtcccgttcgcgtct
cagaacggcgactgccctctcttccctgaggtgtgggcgctggtgtccagccaggccggc
gcctcgcttgcctgtgcagaggccctcgtacgcggcgatgcaacggtggcgatgaactgg
gcaggcggcatgcatcacgccgctgccgcccacgcaagcgggttctgctttgtgaatgac
attgtgttgtgcatccgccggctgctgcggcactaccagcgcgtcctctacgttgacctg
gacgtgcatcacggggacggcgtggagggggccttttatggcaatcaccgcgtgatgacg
ctctcgctgcaccagttcggcaacggcttcttccccggcaccggcgactatccgacgcgt
gagacggccgacagcttcgccatcaacgtcccgctgcccacgcgcacgggagacgccgcg
tacctcttgtcgttccgcactgcactctccagcgtggttcagtgctttgatccggaggcg
atggtcgtgcaatgcggcgcggacaccatagcgggcgacctcattgggcggctttgcgtc
actacgttggcgcacacgcagtgtgtggcagatgtgctgtcgcttgagcgaccgacggta
ctgcttggtggaggcggttatcacgtgtttcacacagcgcgctgctgggcgatccacacc
gccaccgcgctgggtcgcacagctgcacagttgcccttgtacatcccgcgcacagacccg
tactatatggattaccggcgcgaatgcacaccgaagcgtccgacgctgcatgtgtttctc
gaccctgacgtcgatgatccgctgccgctgggggacagcttggcgttctggcgtcagctc
tgtcgcagcatccagtggcagatgcgcgctgcccgccttgtgcggcaggggtttttccgt
acactacagctttgccggcagcgacgggcagcgttgctgagacggttcgctacgcaagag
gcaggaagagaatctggtatcggtgtcagcggctctaagcgcccgcgctcagcaaatgca
acggaccgcgatgccaaggagggggtggaggaccgagtggtctcggcgtga
DBGET
integrated database retrieval system