KEGG   Leishmania donovani: LDBPK_241410
Entry
LDBPK_241410      CDS       T02289                                 
Name
(RefSeq) histone deacetylase, putative
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ldo  Leishmania donovani
Pathway
ldo03082  ATP-dependent chromatin remodeling
ldo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ldo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    LDBPK_241410
   03083 Polycomb repressive complex
    LDBPK_241410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ldo03036]
    LDBPK_241410
Enzymes [BR:ldo01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     LDBPK_241410
Chromosome and associated proteins [BR:ldo03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     LDBPK_241410
   HDAC complexes
    Sin3A-HDAC complex
     LDBPK_241410
    BRAF-HDAC complex
     LDBPK_241410
    REST complex
     LDBPK_241410
    SHIP complex
     LDBPK_241410
    MiDAC complex
     LDBPK_241410
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     LDBPK_241410
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    LDBPK_241410
  Chromatin remodeling factors
   NuRD complex
    LDBPK_241410
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 13391154
NCBI-ProteinID: XP_003861232
UniProt: A0A3Q8IC47
LinkDB
Position
24:506362..507972
AA seq 536 aa
MSTPEQLPALSAAGSPSSGGASSHHSPHEASLSFPASVIPGDASAESPRAWSMPRSSTAS
EESAATSQLQQKPDAPESRLGGRKVVYFVDHSVTSIAYAEGHLMRPSRVRALHALVHSLG
LDNAECMTVCHARPATAEEMGAFHRSAYLECLRQAPVICGNPLDEMSLAFQKEFDVPFAS
QNGDCPLFPEVWALVSSQAGASLACAEALVRGDATVAMNWAGGMHHAAAAHASGFCFVND
IVLCIRRLLRHYQRVLYVDLDVHHGDGVEGAFYGNHRVMTLSLHQFGNGFFPGTGDYPTR
ETADSFAINVPLPTRTGDAAYLLSFRTALSSVVQCFDPEAMVVQCGADTIAGDLIGRLCV
TTLAHTQCVADVLSLERPTVLLGGGGYHVFHTARCWAIHTATALGRTAAQLPLYIPRTDP
YYMDYRRECTPKRPTLHVFLDPDVDDPLPLGDSLAFWRQLCRSIQWQMRAARLVRQGFFR
TLQLCRQRRAALLRRFATQEAGRESGIGVSGSKRPRSANATDRDAKEGVEDRVVSA
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgtcaactccggagcagcttcccgcgctctcagcggcgggctcaccgtcgtcgggaggg
gcttcctctcatcactcaccgcacgaagcatcgctctcgtttcccgcttcggtgattcct
ggcgacgcctctgcggagtctccgcgcgcttggtcgatgccgcggtcttcaacggcgagc
gaggaaagcgcagcaacatcgcaactgcagcaaaagccagatgcaccggagtcacgcctt
ggggggcggaaagtggtgtactttgtggatcactccgtcacttccatagcctatgcagag
ggtcatttgatgcgaccgtctcgtgtgcgtgcgctgcacgcgcttgttcattccctgggc
ctcgacaatgcagaatgcatgactgtatgtcatgctcgtccggcgacggcggaggaaatg
ggggcgtttcaccgcagcgcgtacttggaatgtctgcggcaggcaccggtcatttgcgga
aatccgctggacgagatgtccttagcttttcagaaggaattcgacgtcccgttcgcgtct
cagaacggcgactgccctctcttccctgaggtgtgggcgctggtgtccagccaggccggc
gcctcgcttgcctgtgcagaggccctcgtacgcggcgatgcaacggtggcgatgaactgg
gcaggcggcatgcatcacgccgctgccgcccacgcaagcgggttctgctttgtgaatgac
attgtgttgtgcatccgccggctgctgcggcactaccagcgcgtcctctacgttgacctg
gacgtgcatcacggggacggcgtggagggggccttttatggcaatcaccgcgtgatgacg
ctctcgctgcaccagttcggcaacggcttcttccccggcaccggcgactatccgacgcgt
gagacggccgacagcttcgccatcaacgtcccgctgcccacgcgcacgggagacgccgcg
tacctcttgtcgttccgcactgcactctccagcgtggttcagtgctttgatccggaggcg
atggtcgtgcaatgcggcgcggacaccatagcgggcgacctcattgggcggctttgcgtc
actacgttggcgcacacgcagtgtgtggcagatgtgctgtcgcttgagcgaccgacggta
ctgcttggtggaggcggttatcacgtgtttcacacagcgcgctgctgggcgatccacacc
gccaccgcgctgggtcgcacagctgcacagttgcccttgtacatcccgcgcacagacccg
tactatatggattaccggcgcgaatgcacaccgaagcgtccgacgctgcatgtgtttctc
gaccctgacgtcgatgatccgctgccgctgggggacagcttggcgttctggcgtcagctc
tgtcgcagcatccagtggcagatgcgcgctgcccgccttgtgcggcaggggtttttccgt
acactacagctttgccggcagcgacgggcagcgttgctgagacggttcgctacgcaagag
gcaggaagagaatctggtatcggtgtcagcggctctaagcgcccgcgctcagcaaatgca
acggaccgcgatgccaaggagggggtggaggaccgagtggtctcggcgtga

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